STRINGSTRING
AMM49947.1 AMM49947.1 mdh mdh AMM50180.1 AMM50180.1 AMM50210.1 AMM50210.1 AMM50229.1 AMM50229.1 AMM50317.1 AMM50317.1 AMM50328.1 AMM50328.1 AMM50329.1 AMM50329.1 metZ metZ metXA metXA AMM50388.1 AMM50388.1 AMM50405.1 AMM50405.1 AMM50615.1 AMM50615.1 AMM50616.1 AMM50616.1 AMM50622.1 AMM50622.1 AMM51025.1 AMM51025.1 AMM51059.1 AMM51059.1 asd asd metK metK ahcY ahcY AMM52908.1 AMM52908.1 AMM51845.1 AMM51845.1 AMM51969.1 AMM51969.1 AMM52093.1 AMM52093.1 speH speH AMM52232.1 AMM52232.1 AMM52492.1 AMM52492.1 metXA-2 metXA-2 AMM52495.1 AMM52495.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMM49947.1Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (312 aa)
AMM50180.1Branched-chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
AMM50210.1Phosphoserine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
AMM50229.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (425 aa)
AMM50317.1Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
AMM50328.1Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. (304 aa)
AMM50329.1Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (392 aa)
metXAHomoserine acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (339 aa)
AMM50388.1Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1229 aa)
AMM50405.1Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
AMM50615.1Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (358 aa)
AMM50616.13-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (630 aa)
AMM50622.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (299 aa)
AMM51025.1GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AMM51059.11-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (329 aa)
metKS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (434 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (435 aa)
AMM52908.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
AMM51845.1Amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AMM51969.1Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)
AMM52093.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
speHSpermidine synthase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the spermidine/spermine synthase family. (425 aa)
AMM52232.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (226 aa)
AMM52492.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (442 aa)
metXA-2Homoserine acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (351 aa)
AMM52495.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
Your Current Organism:
Rufibacter sp. DG15C
NCBI taxonomy Id: 1379909
Other names: R. sp. DG15C
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