STRINGSTRING
AKQ46503.1 AKQ46503.1 AKQ47391.1 AKQ47391.1 AKQ46077.1 AKQ46077.1 AKQ45969.1 AKQ45969.1 AKQ45856.1 AKQ45856.1 AKQ45622.1 AKQ45622.1 AKQ45613.1 AKQ45613.1 thrS thrS ychF ychF AKQ44905.1 AKQ44905.1 AKQ44759.1 AKQ44759.1 AKQ44504.1 AKQ44504.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKQ46503.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
AKQ47391.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
AKQ46077.1MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (734 aa)
AKQ45969.1Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AKQ45856.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
AKQ45622.1Molybdopterin converting factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
AKQ45613.1Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
thrSthreonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (645 aa)
ychFGTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa)
AKQ44905.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AKQ44759.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
AKQ44504.12Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
Your Current Organism:
Rufibacter sp. DG31D
NCBI taxonomy Id: 1379910
Other names: R. sp. DG31D
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