(4 nodes) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain network (Rufibacter sp. DG31D)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKQ45856.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
	AKQ47733.1	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
	AKQ44905.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	AKQ45613.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)

Your Current Organism:

Rufibacter sp. DG31D

NCBI taxonomy Id: 1379910
Other names: R. sp. DG31D

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKQ44905.1	AKQ45613.1	TH63_03540	TH63_08045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AKQ44905.1	AKQ45856.1	TH63_03540	TH63_09715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AKQ45613.1	AKQ44905.1	TH63_08045	TH63_03540	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AKQ45613.1	AKQ45856.1	TH63_08045	TH63_09715	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
AKQ45613.1	AKQ47733.1	TH63_08045	TH63_14050	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AKQ45856.1	AKQ44905.1	TH63_09715	TH63_03540	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AKQ45856.1	AKQ45613.1	TH63_09715	TH63_08045	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
AKQ45856.1	AKQ47733.1	TH63_09715	TH63_14050	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AKQ47733.1	AKQ45613.1	TH63_14050	TH63_08045	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AKQ47733.1	AKQ45856.1	TH63_14050	TH63_09715	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805