STRINGSTRING
DSY0245 DSY0245 DSY0246 DSY0246 frdC frdC frdA frdA frdB frdB DSY0982 DSY0982 sucD sucD sucD-2 sucD-2 DSY1926 DSY1926 DSY3532 DSY3532
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSY0245Hypothetical protein; Similarity to COG0045 Succinyl-CoA synthetase beta subunit(Evalue: 1E-67). (372 aa)
DSY0246Hypothetical protein; Similarity to COG0074 Succinyl-CoA synthetase alpha subunit(Evalue: 3E-45). (188 aa)
frdCSimilarity to COG2009 Succinate dehydrogenase/fumarate reductase cytochrome b subunit(Evalue: 2E-50). (201 aa)
frdASimilarity to COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits(Evalue: 0). (578 aa)
frdBSimilarity to COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein(Evalue: 1E-95). (250 aa)
DSY0982Hypothetical protein; Similarity to COG0045 Succinyl-CoA synthetase beta subunit(Evalue: 4E-71). (390 aa)
sucDHypothetical protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (293 aa)
sucD-2Hypothetical protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (298 aa)
DSY1926Hypothetical protein; Similarity to COG0045 Succinyl-CoA synthetase beta subunit(Evalue: 9E-50). (425 aa)
DSY3532Hypothetical protein; Similarity to COG0247 Fe-S oxidoreductases. (390 aa)
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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