STRINGSTRING
DSY0118 DSY0118 DSY0119 DSY0119 DSY0120 DSY0120 DSY0191 DSY0191 DSY0199 DSY0199 DSY1190 DSY1190 DSY1191 DSY1191 DSY1192 DSY1192 DSY1974 DSY1974 DSY2090 DSY2090 DSY2110 DSY2110 DSY2111 DSY2111 DSY2112 DSY2112 DSY2248 DSY2248 DSY2285 DSY2285 DSY2298 DSY2298 DSY2299 DSY2299 DSY2300 DSY2300 DSY2301 DSY2301 DSY2302 DSY2302 spoIIAB spoIIAB DSY2304 DSY2304 DSY2323 DSY2323 DSY2341 DSY2341 DSY2342 DSY2342 DSY2403 DSY2403 DSY2504 DSY2504 DSY2670 DSY2670 gpr gpr DSY2893 DSY2893 DSY2894 DSY2894 DSY2895 DSY2895 DSY2896 DSY2896 DSY3112 DSY3112 DSY3113 DSY3113 DSY3143 DSY3143 DSY3242 DSY3242 DSY4887 DSY4887 DSY4908 DSY4908 DSY4949 DSY4949 DSY4950 DSY4950 DSY5046 DSY5046
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSY0118Hypothetical protein. (526 aa)
DSY0119Hypothetical protein. (370 aa)
DSY0120Hypothetical protein. (413 aa)
DSY0191Hypothetical protein; Similarity to COG2002 Regulators of stationary/sporulation gene expression(Evalue: 1E-59). (180 aa)
DSY0199Hypothetical protein; Similarity to COG2208 Serine phosphatase RsbU, regulator of sigma subunit(Evalue: 2E-52). (703 aa)
DSY1190Hypothetical protein. (533 aa)
DSY1191Hypothetical protein. (387 aa)
DSY1192Hypothetical protein. (391 aa)
DSY1974Hypothetical protein; Similarity to COG0740 Protease subunit of ATP-dependent Clp proteases(Evalue: 1E-70). (209 aa)
DSY2090Hypothetical protein. (68 aa)
DSY2110Hypothetical protein. (387 aa)
DSY2111Hypothetical protein. (499 aa)
DSY2112Hypothetical protein; Similarity to COG0531 Amino acid transporters. (368 aa)
DSY2248Hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (491 aa)
DSY2285Hypothetical protein. (149 aa)
DSY2298Hypothetical protein. (497 aa)
DSY2299Hypothetical protein. (120 aa)
DSY2300Hypothetical protein. (334 aa)
DSY2301Hypothetical protein. (143 aa)
DSY2302Hypothetical protein; Similarity to COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)(Evalue: 2E-22); Belongs to the anti-sigma-factor antagonist family. (115 aa)
spoIIABHypothetical protein; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (145 aa)
DSY2304Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (260 aa)
DSY2323Hypothetical protein; Similarity to COG1300 Uncharacterized membrane protein. (207 aa)
DSY2341Hypothetical protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (272 aa)
DSY2342Hypothetical protein; Similarity to COG0750 Predicted membrane-associated Zn-dependent proteases 1(Evalue: 7E-84). (413 aa)
DSY2403Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (248 aa)
DSY2504Hypothetical protein; Similarity to COG1873 Uncharacterized ACR. (94 aa)
DSY2670Hypothetical protein; Similarity to COG3314 Uncharacterized BCR(Evalue: 2E-63). (384 aa)
gprHypothetical protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (328 aa)
DSY2893Hypothetical protein; Similarity to COG1873 Uncharacterized ACR. (90 aa)
DSY2894Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (266 aa)
DSY2895Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (238 aa)
DSY2896Hypothetical protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. (301 aa)
DSY3112Hypothetical protein. (403 aa)
DSY3113Hypothetical protein. (89 aa)
DSY3143Hypothetical protein. (360 aa)
DSY3242Hypothetical protein. (216 aa)
DSY4887Hypothetical protein. (104 aa)
DSY4908Hypothetical protein; Similarity to COG2385 Sporulation protein and related proteins(Evalue: 3E-44). (345 aa)
DSY4949Hypothetical protein; Similarity to COG1011 Predicted hydrolases of the HAD superfamily(Evalue: 8E-31). (454 aa)
DSY4950Hypothetical protein; Similarity to COG3773 Cell wall hydrolyses involved in spore germination(Evalue: 4E-34). (231 aa)
DSY5046Hypothetical protein. (194 aa)
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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