(6 nodes) OmpR/PhoB-type DNA-binding domain, and PAS fold network (Desulfitobacterium hafniense)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DSY1076	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41). (536 aa)
	DSY1077	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50). (228 aa)
	DSY2890	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62). (467 aa)
	DSY2891	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71). (263 aa)
	DSY3638	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-42). (305 aa)
	DSY4121	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56). (238 aa)

Your Current Organism:

Desulfitobacterium hafniense

NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
DSY1076	DSY1077	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	0.966
DSY1076	DSY2890	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	0.433
DSY1076	DSY2891	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	0.863
DSY1076	DSY4121	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56).	0.869
DSY1077	DSY1076	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	0.966
DSY1077	DSY2890	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	0.979
DSY1077	DSY2891	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	0.909
DSY1077	DSY3638	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-42).	0.856
DSY1077	DSY4121	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56).	0.909
DSY2890	DSY1076	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	0.433
DSY2890	DSY1077	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	0.979
DSY2890	DSY2891	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	0.999
DSY2890	DSY4121	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56).	0.992
DSY2891	DSY1076	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-41).	0.863
DSY2891	DSY1077	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	0.909
DSY2891	DSY2890	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-62).	0.999
DSY2891	DSY3638	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-42).	0.974
DSY2891	DSY4121	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56).	0.905
DSY3638	DSY1077	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-42).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 2E-50).	0.856
DSY3638	DSY2891	Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-42).	Hypothetical protein; Similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 6E-71).	0.974