STRINGSTRING
DSY0907 DSY0907 resB resB ccdA ccdA ccmB ccmB DSY5018 DSY5018 DSY4141 DSY4141 DSY4519 DSY4519 DSY4534 DSY4534 ccsA ccsA DSY4675 DSY4675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSY0907Similarity to COG0785 Cytochrome c biogenesis protein. (237 aa)
resBSimilarity to COG1333 ResB protein required for cytochrome c biosynthesis(Evalue: 1E-29). (434 aa)
ccdASimilarity to COG0785 Cytochrome c biogenesis protein(Evalue: 2E-39). (223 aa)
ccmBPutative cytochrome c biogenesis protein heme exporter protein B; Similarity to COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component. (162 aa)
DSY5018Hypothetical protein; Similarity to COG0457 TPR-repeat-containing proteins. (214 aa)
DSY4141Similarity to COG0785 Cytochrome c biogenesis protein(Evalue: 2E-23). (233 aa)
DSY4519Hypothetical protein; Similarity to COG0785 Cytochrome c biogenesis protein(Evalue: 6E-33). (250 aa)
DSY4534Hypothetical protein; Similarity to COG0785 Cytochrome c biogenesis protein(Evalue: 4E-30). (250 aa)
ccsASimilarity to COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component(Evalue: 5E-53). (284 aa)
DSY4675Hypothetical protein; Similarity to COG0785 Cytochrome c biogenesis protein(Evalue: 5E-26). (229 aa)
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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