(22 nodes) ABC transporter transmembrane region, and ABC transporters in lipid homeostasis network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A0A017RYV0	Uncharacterized protein. (472 aa)
	A0A017S249	P-loop containing nucleoside triphosphate hydrolase protein. (1429 aa)
	A0A017S2E9	Uncharacterized protein. (875 aa)
	A0A017S3I3	P-loop containing nucleoside triphosphate hydrolase protein. (1260 aa)
	A0A017S3P8	ABC multidrug transporter SidT. (1327 aa)
	A0A017S695	Nickel/cobalt efflux system; Belongs to the NiCoT transporter (TC 2.A.52) family. (473 aa)
	A0A017S8J3	Putative ABC metal ion transporter. (1538 aa)
	A0A017SCP8	Zn(2)-C6 fungal-type domain-containing protein. (1028 aa)
	A0A017SE16	Ras guanyl-nucleotide exchange factor RasGEF. (952 aa)
	A0A017SF60	Uncharacterized protein. (101 aa)
	A0A017SFE0	Fungal_trans domain-containing protein. (752 aa)
	A0A017SKJ1	Putative ABC transporter. (604 aa)
	A0A017SL05	Putative ABC bile acid transporter. (1500 aa)
	A0A017SM75	Putative ABC transporter. (589 aa)
	A0A017SML2	Putative ABC transporter. (1479 aa)
	A0A017SMQ7	Heavy metal tolerance protein. (923 aa)
	A0A017SQD3	Abc transporter. (1471 aa)
	A0A017SQX3	AB hydrolase-1 domain-containing protein. (246 aa)
	A0A017SRR7	P-loop containing nucleoside triphosphate hydrolase protein. (1259 aa)
	A0A017SSU4	ABC transporter domain-containing protein. (1094 aa)
	A0A017STU4	P-loop containing nucleoside triphosphate hydrolase protein. (1605 aa)
	A0A017STY8	ABC a-pheromone efflux pump AtrD. (1312 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017RYV0	A0A017S2E9	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A017RYV0	A0A017SE16	Uncharacterized protein.	Ras guanyl-nucleotide exchange factor RasGEF.	0.465
A0A017RYV0	A0A017SMQ7	Uncharacterized protein.	Heavy metal tolerance protein.	0.409
A0A017S249	A0A017S2E9	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.419
A0A017S249	A0A017SCP8	P-loop containing nucleoside triphosphate hydrolase protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.480
A0A017S249	A0A017SE16	P-loop containing nucleoside triphosphate hydrolase protein.	Ras guanyl-nucleotide exchange factor RasGEF.	0.562
A0A017S249	A0A017SFE0	P-loop containing nucleoside triphosphate hydrolase protein.	Fungal_trans domain-containing protein.	0.480
A0A017S249	A0A017SKJ1	P-loop containing nucleoside triphosphate hydrolase protein.	Putative ABC transporter.	0.542
A0A017S249	A0A017SM75	P-loop containing nucleoside triphosphate hydrolase protein.	Putative ABC transporter.	0.542
A0A017S249	A0A017SMQ7	P-loop containing nucleoside triphosphate hydrolase protein.	Heavy metal tolerance protein.	0.419
A0A017S249	A0A017SSU4	P-loop containing nucleoside triphosphate hydrolase protein.	ABC transporter domain-containing protein.	0.542
A0A017S2E9	A0A017RYV0	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A017S2E9	A0A017S249	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.419
A0A017S2E9	A0A017S3I3	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.409
A0A017S2E9	A0A017S3P8	Uncharacterized protein.	ABC multidrug transporter SidT.	0.409
A0A017S2E9	A0A017S695	Uncharacterized protein.	Nickel/cobalt efflux system; Belongs to the NiCoT transporter (TC 2.A.52) family.	0.419
A0A017S2E9	A0A017S8J3	Uncharacterized protein.	Putative ABC metal ion transporter.	0.419
A0A017S2E9	A0A017SF60	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A017S2E9	A0A017SL05	Uncharacterized protein.	Putative ABC bile acid transporter.	0.419
A0A017S2E9	A0A017SML2	Uncharacterized protein.	Putative ABC transporter.	0.419