(58 nodes) Neddylation, and Protein deneddylation network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A017S0S4	Uncharacterized protein. (65 aa)
	A0A017S1F7	Putative NEDD8 conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
	A0A017S251	Sulfur metabolite repression control protein. (681 aa)
	A0A017S3F1	WD40 repeat-like protein. (534 aa)
	A0A017S3Q2	WD_REPEATS_REGION domain-containing protein. (1067 aa)
	A0A017S4C7	Putative cell division control protein Cdc4. (1039 aa)
	A0A017S4E2	COP9 signalosome subunit CsnD. (418 aa)
	A0A017S4N2	Putative galactose oxidase. (770 aa)
	A0A017S583	WD40 repeat-like protein. (834 aa)
	A0A017S667	AN1-type domain-containing protein. (72 aa)
	A0A017S670	F5/8 type C domain-containing protein. (211 aa)
	A0A017S722	PCI domain-containing protein. (312 aa)
	A0A017S777	Purine and uridine phosphorylase. (312 aa)
	A0A017S887	Cullin-1; Belongs to the cullin family. (755 aa)
	A0A017S8S6	Ulp1 protease family protein. (259 aa)
	A0A017S9G8	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. (161 aa)
	A0A017S9J1	Uncharacterized protein. (118 aa)
	A0A017SA81	DUF1793-domain-containing protein. (688 aa)
	A0A017SAD3	Putative COP9 signalosome subunit 6. (394 aa)
	A0A017SAG0	Wd and tetratricopeptide repeat protein. (1123 aa)
	A0A017SAJ9	Uncharacterized protein. (480 aa)
	A0A017SBQ0	Uncharacterized protein. (84 aa)
	A0A017SBU3	BTB domain-containing protein. (273 aa)
	A0A017SBV9	BTB domain-containing protein. (269 aa)
	A0A017SCA9	Putative PHD finger and JmjC domain protein. (1409 aa)
	A0A017SD36	Cullin-4B; Belongs to the cullin family. (2534 aa)
	A0A017SDP3	Uncharacterized protein. (97 aa)
	A0A017SEP0	WD40 repeat-like protein. (683 aa)
	A0A017SEZ4	Uncharacterized protein. (117 aa)
	A0A017SFR2	Putative SCF ubiquitin ligase subunit CulC; Belongs to the cullin family. (823 aa)
	A0A017SG37	Putative COP9 signalosome subunit 8. (213 aa)
	A0A017SG70	Uncharacterized protein. (287 aa)
	A0A017SGR3	Putative COP9 signalosome subunit 2. (498 aa)
	A0A017SGY4	COP9 signalosome complex subunit 1. (477 aa)
	A0A017SHC7	Putative UV-damaged DNA binding protein. (1140 aa)
	A0A017SHF0	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (562 aa)
	A0A017SHG9	POZ domain-containing protein; Belongs to the SKP1 family. (102 aa)
	A0A017SI48	Uncharacterized protein. (304 aa)
	A0A017SI89	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (269 aa)
	A0A017SIB8	Galactose oxidase. (760 aa)
	A0A017SIM0	WD repeat protein. (631 aa)
	A0A017SIP4	WD domain protein. (726 aa)
	A0A017SIW8	E2_bind domain-containing protein. (426 aa)
	A0A017SIX0	COP9 signalosome subunit CsnE. (334 aa)
	A0A017SJC9	TIP120-domain-containing protein. (1037 aa)
	A0A017SKF5	Uncharacterized protein. (67 aa)
	A0A017SKJ5	Uncharacterized protein. (502 aa)
	A0A017SKR4	Putative RNA polymerase II transcription factor SIII subunit A. (393 aa)
	A0A017SKR9	F-box domain-containing protein. (630 aa)
	A0A017SL61	Putative F-box protein. (553 aa)
	A0A017SLM6	WD40 repeat-like protein. (674 aa)
	A0A017SM47	Ubiquitin. (78 aa)
	A0A017SMX9	Putative bifunctional fatty acid transporter and acyl-CoA synthetase. (635 aa)
	A0A017SNC4	WD domain-containing protein. (239 aa)
	A0A017SP82	Cyclic nucleotide-binding domain protein. (933 aa)
	A0A017SRC3	Putative ubiquitin ligase subunit HrtA. (119 aa)
	A0A017SSX2	Amidase signature enzyme. (677 aa)
	A0A017STP3	Putative long-chain fatty acid transporter. (645 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017S0S4	A0A017S583	Uncharacterized protein.	WD40 repeat-like protein.	0.470
A0A017S0S4	A0A017S667	Uncharacterized protein.	AN1-type domain-containing protein.	0.464
A0A017S0S4	A0A017S777	Uncharacterized protein.	Purine and uridine phosphorylase.	0.642
A0A017S0S4	A0A017S887	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.518
A0A017S0S4	A0A017S9G8	Uncharacterized protein.	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.	0.529
A0A017S0S4	A0A017S9J1	Uncharacterized protein.	Uncharacterized protein.	0.520
A0A017S0S4	A0A017SCA9	Uncharacterized protein.	Putative PHD finger and JmjC domain protein.	0.400
A0A017S0S4	A0A017SEP0	Uncharacterized protein.	WD40 repeat-like protein.	0.470
A0A017S0S4	A0A017SFR2	Uncharacterized protein.	Putative SCF ubiquitin ligase subunit CulC; Belongs to the cullin family.	0.518
A0A017S0S4	A0A017SG70	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A017S0S4	A0A017SHG9	Uncharacterized protein.	POZ domain-containing protein; Belongs to the SKP1 family.	0.543
A0A017S0S4	A0A017SIW8	Uncharacterized protein.	E2_bind domain-containing protein.	0.403
A0A017S0S4	A0A017SIX0	Uncharacterized protein.	COP9 signalosome subunit CsnE.	0.447
A0A017S0S4	A0A017SM47	Uncharacterized protein.	Ubiquitin.	0.559
A0A017S0S4	A0A017SNC4	Uncharacterized protein.	WD domain-containing protein.	0.428
A0A017S0S4	A0A017SRC3	Uncharacterized protein.	Putative ubiquitin ligase subunit HrtA.	0.503
A0A017S0S4	A0A017SSX2	Uncharacterized protein.	Amidase signature enzyme.	0.545
A0A017S1F7	A0A017S251	Putative NEDD8 conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Sulfur metabolite repression control protein.	0.620
A0A017S1F7	A0A017S3F1	Putative NEDD8 conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	WD40 repeat-like protein.	0.667
A0A017S1F7	A0A017S3Q2	Putative NEDD8 conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	WD_REPEATS_REGION domain-containing protein.	0.508