(6 nodes) NMS complex, and MIS12/MIND type complex network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A017S3L9	Uncharacterized protein. (570 aa)
	A0A017S7J6	Uncharacterized protein. (258 aa)
	A0A017SCL8	Putative kinetochore protein nuf2. (463 aa)
	A0A017SDX4	Spc7-domain-containing protein. (1523 aa)
	A0A017SLH3	Putative kinetochore protein spc24. (200 aa)
	A0A017SN40	Mis14-domain-containing protein. (272 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017S3L9	A0A017S7J6	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A017S3L9	A0A017SCL8	Uncharacterized protein.	Putative kinetochore protein nuf2.	0.946
A0A017S3L9	A0A017SDX4	Uncharacterized protein.	Spc7-domain-containing protein.	0.952
A0A017S3L9	A0A017SLH3	Uncharacterized protein.	Putative kinetochore protein spc24.	0.967
A0A017S3L9	A0A017SN40	Uncharacterized protein.	Mis14-domain-containing protein.	0.969
A0A017S7J6	A0A017S3L9	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A017S7J6	A0A017SCL8	Uncharacterized protein.	Putative kinetochore protein nuf2.	0.999
A0A017S7J6	A0A017SDX4	Uncharacterized protein.	Spc7-domain-containing protein.	0.685
A0A017S7J6	A0A017SLH3	Uncharacterized protein.	Putative kinetochore protein spc24.	0.987
A0A017S7J6	A0A017SN40	Uncharacterized protein.	Mis14-domain-containing protein.	0.483
A0A017SCL8	A0A017S3L9	Putative kinetochore protein nuf2.	Uncharacterized protein.	0.946
A0A017SCL8	A0A017S7J6	Putative kinetochore protein nuf2.	Uncharacterized protein.	0.999
A0A017SCL8	A0A017SDX4	Putative kinetochore protein nuf2.	Spc7-domain-containing protein.	0.755
A0A017SCL8	A0A017SLH3	Putative kinetochore protein nuf2.	Putative kinetochore protein spc24.	0.966
A0A017SDX4	A0A017S3L9	Spc7-domain-containing protein.	Uncharacterized protein.	0.952
A0A017SDX4	A0A017S7J6	Spc7-domain-containing protein.	Uncharacterized protein.	0.685
A0A017SDX4	A0A017SCL8	Spc7-domain-containing protein.	Putative kinetochore protein nuf2.	0.755
A0A017SDX4	A0A017SLH3	Spc7-domain-containing protein.	Putative kinetochore protein spc24.	0.874
A0A017SDX4	A0A017SN40	Spc7-domain-containing protein.	Mis14-domain-containing protein.	0.706
A0A017SLH3	A0A017S3L9	Putative kinetochore protein spc24.	Uncharacterized protein.	0.967