(12 nodes) Mixed, incl. Zinc finger, GATA-type, and CCAAT-binding factor complex network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A017S0V6	Uncharacterized protein. (332 aa)
	A0A017S7C9	GATA-domain-containing protein. (358 aa)
	A0A017S7F7	Putative sensor histidine kinase/response regulator. (1342 aa)
	A0A017S8A6	GATA-type domain-containing protein. (880 aa)
	A0A017SBG4	Uncharacterized protein. (557 aa)
	A0A017SDU8	CCAAT-binding factor complex subunit HapC. (197 aa)
	A0A017SGE8	BZIP domain-containing protein. (486 aa)
	A0A017SHG4	Histone-fold-containing protein. (189 aa)
	A0A017SHP1	Uncharacterized protein. (810 aa)
	A0A017SKI6	CCAAT-binding factor complex subunit HapE. (276 aa)
	A0A017SNN5	NAD(P)-binding protein. (347 aa)
	A0A017SQ52	S-adenosyl-L-methionine-dependent methyltransferase. (370 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017S0V6	A0A017S8A6	Uncharacterized protein.	GATA-type domain-containing protein.	0.467
A0A017S0V6	A0A017SBG4	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A017S0V6	A0A017SDU8	Uncharacterized protein.	CCAAT-binding factor complex subunit HapC.	0.998
A0A017S0V6	A0A017SGE8	Uncharacterized protein.	BZIP domain-containing protein.	0.941
A0A017S0V6	A0A017SHG4	Uncharacterized protein.	Histone-fold-containing protein.	0.980
A0A017S0V6	A0A017SKI6	Uncharacterized protein.	CCAAT-binding factor complex subunit HapE.	0.998
A0A017S7C9	A0A017S7F7	GATA-domain-containing protein.	Putative sensor histidine kinase/response regulator.	0.430
A0A017S7C9	A0A017SDU8	GATA-domain-containing protein.	CCAAT-binding factor complex subunit HapC.	0.605
A0A017S7C9	A0A017SHG4	GATA-domain-containing protein.	Histone-fold-containing protein.	0.559
A0A017S7C9	A0A017SHP1	GATA-domain-containing protein.	Uncharacterized protein.	0.841
A0A017S7C9	A0A017SKI6	GATA-domain-containing protein.	CCAAT-binding factor complex subunit HapE.	0.559
A0A017S7C9	A0A017SNN5	GATA-domain-containing protein.	NAD(P)-binding protein.	0.607
A0A017S7C9	A0A017SQ52	GATA-domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase.	0.409
A0A017S7F7	A0A017S7C9	Putative sensor histidine kinase/response regulator.	GATA-domain-containing protein.	0.430
A0A017S7F7	A0A017SHP1	Putative sensor histidine kinase/response regulator.	Uncharacterized protein.	0.563
A0A017S8A6	A0A017S0V6	GATA-type domain-containing protein.	Uncharacterized protein.	0.467
A0A017S8A6	A0A017SBG4	GATA-type domain-containing protein.	Uncharacterized protein.	0.817
A0A017S8A6	A0A017SDU8	GATA-type domain-containing protein.	CCAAT-binding factor complex subunit HapC.	0.605
A0A017S8A6	A0A017SGE8	GATA-type domain-containing protein.	BZIP domain-containing protein.	0.509
A0A017S8A6	A0A017SHG4	GATA-type domain-containing protein.	Histone-fold-containing protein.	0.559