(23 nodes) SCF ubiquitin ligase complex network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A017RZY7	Putative lignostilbene dioxygenase. (601 aa)
	A0A017S251	Sulfur metabolite repression control protein. (681 aa)
	A0A017S4K0	Alkaline phosphatase-like protein. (610 aa)
	A0A017S583	WD40 repeat-like protein. (834 aa)
	A0A017S749	Uncharacterized protein. (612 aa)
	A0A017S887	Cullin-1; Belongs to the cullin family. (755 aa)
	A0A017S8L1	DNA repair protein Rad7, protein. (602 aa)
	A0A017S9I1	Putative DUF221 domain protein. (832 aa)
	A0A017SBW8	F-box domain protein. (718 aa)
	A0A017SE82	F-box domain protein. (582 aa)
	A0A017SEP0	WD40 repeat-like protein. (683 aa)
	A0A017SFX1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (114 aa)
	A0A017SG11	F-box domain-containing protein. (551 aa)
	A0A017SHV7	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	A0A017SL61	Putative F-box protein. (553 aa)
	A0A017SM47	Ubiquitin. (78 aa)
	A0A017SMS1	F-box domain protein. (728 aa)
	A0A017SN97	UBIQUITIN_CONJUGAT_2 domain-containing protein. (218 aa)
	A0A017SNA8	Uncharacterized protein. (224 aa)
	A0A017SP82	Cyclic nucleotide-binding domain protein. (933 aa)
	A0A017SSB2	F-box domain-containing protein. (452 aa)
	A0A017SSV3	DUF1769-domain-containing protein. (322 aa)
	A0A017STV7	Uncharacterized protein. (169 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017RZY7	A0A017S887	Putative lignostilbene dioxygenase.	Cullin-1; Belongs to the cullin family.	0.483
A0A017RZY7	A0A017SL61	Putative lignostilbene dioxygenase.	Putative F-box protein.	0.402
A0A017S251	A0A017S583	Sulfur metabolite repression control protein.	WD40 repeat-like protein.	0.776
A0A017S251	A0A017S887	Sulfur metabolite repression control protein.	Cullin-1; Belongs to the cullin family.	0.994
A0A017S251	A0A017SEP0	Sulfur metabolite repression control protein.	WD40 repeat-like protein.	0.792
A0A017S251	A0A017SHV7	Sulfur metabolite repression control protein.	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.402
A0A017S251	A0A017SM47	Sulfur metabolite repression control protein.	Ubiquitin.	0.840
A0A017S251	A0A017SN97	Sulfur metabolite repression control protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.733
A0A017S251	A0A017SP82	Sulfur metabolite repression control protein.	Cyclic nucleotide-binding domain protein.	0.820
A0A017S583	A0A017S251	WD40 repeat-like protein.	Sulfur metabolite repression control protein.	0.776
A0A017S583	A0A017S887	WD40 repeat-like protein.	Cullin-1; Belongs to the cullin family.	0.928
A0A017S583	A0A017SHV7	WD40 repeat-like protein.	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.813
A0A017S583	A0A017SM47	WD40 repeat-like protein.	Ubiquitin.	0.912
A0A017S583	A0A017SN97	WD40 repeat-like protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.752
A0A017S583	A0A017SP82	WD40 repeat-like protein.	Cyclic nucleotide-binding domain protein.	0.716
A0A017S749	A0A017S887	Uncharacterized protein.	Cullin-1; Belongs to the cullin family.	0.765
A0A017S749	A0A017SM47	Uncharacterized protein.	Ubiquitin.	0.680
A0A017S887	A0A017RZY7	Cullin-1; Belongs to the cullin family.	Putative lignostilbene dioxygenase.	0.483
A0A017S887	A0A017S251	Cullin-1; Belongs to the cullin family.	Sulfur metabolite repression control protein.	0.994
A0A017S887	A0A017S583	Cullin-1; Belongs to the cullin family.	WD40 repeat-like protein.	0.928