(94 nodes) Zinc finger, RING/FYVE/PHD-type network (Aspergillus ruber)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A017S8U3	Uncharacterized protein. (1479 aa)
	A0A017SR11	RING finger domain protein. (322 aa)
	A0A017SQY6	PHD-type domain-containing protein. (562 aa)
	A0A017SQP8	RING-type domain-containing protein. (1623 aa)
	A0A017SPU9	PHD-type domain-containing protein. (762 aa)
	A0A017SPR6	FYVE-type domain-containing protein. (293 aa)
	A0A017SNX8	RING-type domain-containing protein. (976 aa)
	A0A017SNW7	Putative PHD finger domain protein. (1168 aa)
	A0A017SNS4	RING-CH-type domain-containing protein. (460 aa)
	A0A017SNK0	PHD domain-containing protein. (601 aa)
	A0A017SNJ8	Uncharacterized protein. (343 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (389 aa)
	A0A017SNG0	PHD transcription factor. (1718 aa)
	A0A017SNF4	RING-type domain-containing protein. (832 aa)
	A0A017SNE5	RING-type domain-containing protein. (451 aa)
	A0A017SN43	SP-RING-type domain-containing protein. (1054 aa)
	A0A017SLW8	U-box domain-containing protein. (1044 aa)
	A0A017SLE0	U-box domain protein. (284 aa)
	A0A017SLC4	RING-type domain-containing protein. (844 aa)
	A0A017SKY9	SET domain-containing protein. (948 aa)
	A0A017SKA1	RING-type domain-containing protein. (189 aa)
	A0A017SK48	RING-type domain-containing protein. (134 aa)
	A0A017SJZ4	Uncharacterized protein. (449 aa)
	A0A017SJY1	MIZ zinc finger protein. (524 aa)
	A0A017SJR6	Uncharacterized protein. (225 aa)
	A0A017SJP7	DNA repair protein rad18. (438 aa)
	A0A017SJF9	Uncharacterized protein. (1228 aa)
	A0A017SIX9	RBR-type E3 ubiquitin transferase. (607 aa)
	A0A017SIS8	Uncharacterized protein. (886 aa)
	A0A017SIE8	Putative peroxisome biosynthesis protein (PAS10/Peroxin-12). (483 aa)
	A0A017SI85	RING-type domain-containing protein. (799 aa)
	A0A017SI04	Putative ubiquitin-protein ligase. (974 aa)
	A0A017SHU5	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (453 aa)
	A0A017SHT7	PHD-type domain-containing protein. (834 aa)
	A0A017SHS4	Uncharacterized protein. (639 aa)
	A0A017SHS3	PHD-type domain-containing protein. (340 aa)
	A0A017SHJ5	E3 ubiquitin-protein ligase PEP5. (952 aa)
	A0A017SGW8	RING-type domain-containing protein. (430 aa)
	A0A017SFA9	RING-type domain-containing protein. (296 aa)
	A0A017SEW3	RING-type domain-containing protein. (212 aa)
	A0A017SEV8	SnRNP assembly factor. (611 aa)
	A0A017SET3	RING-type domain-containing protein. (793 aa)
	A0A017SEH3	RBR-type E3 ubiquitin transferase. (369 aa)
	A0A017SEG2	SP-RING-type domain-containing protein. (457 aa)
	A0A017SEG1	RING-type domain-containing protein. (145 aa)
	A0A017SDS5	RING-type domain-containing protein. (470 aa)
	A0A017SDP8	RING-type domain-containing protein. (1542 aa)
	A0A017SDE3	Chromatin modification-related protein. (415 aa)
	A0A017SDD0	FYVE-domain-containing protein. (58 aa)
	A0A017SDB4	RING-type domain-containing protein. (140 aa)
	A0A017SD96	Anaphase-promoting complex subunit 11. (109 aa)
	A0A017SD51	Putative PHD transcription factor. (843 aa)
	A0A017SD42	Chromatin modification-related protein. (702 aa)
	A0A017SD34	RING-type domain-containing protein. (156 aa)
	A0A017SCZ5	Putative regulator of gluconeogenesis Rmd5. (411 aa)
	A0A017SC33	RING-type domain-containing protein. (425 aa)
	A0A017SBY1	WD40 repeat-like protein. (1258 aa)
	A0A017SBE4	DNA repair protein RAD5. (1250 aa)
	A0A017SB15	Putative SNF2 family helicase. (896 aa)
	A0A017SA58	DWNN-domain-containing protein. (597 aa)
	A0A017SA50	Ubiquitin carboxyl-terminal hydrolase. (787 aa)
	A0A017S9Y4	Cyclophilin-like protein. (578 aa)
	A0A017S955	RBR-type E3 ubiquitin transferase. (281 aa)
	A0A017S8V5	Putative peroxisome biosynthesis protein. (374 aa)
	A0A017S8C4	Putative DNA excision repair protein Rad16. (923 aa)
	A0A017S820	Putative cell cycle control protein. (474 aa)
	A0A017S814	Uncharacterized protein. (636 aa)
	A0A017S7X7	RING-type domain-containing protein. (81 aa)
	A0A017S7S6	Uncharacterized protein. (342 aa)
	A0A017S6S4	PHD domain-containing protein. (828 aa)
	A0A017S6C4	Zf-CHY-domain-containing protein. (725 aa)
	A0A017S663	Uncharacterized protein. (1477 aa)
	A0A017S612	Uncharacterized protein. (693 aa)
	A0A017S552	Uncharacterized protein. (876 aa)
	A0A017S543	RING-type domain-containing protein. (371 aa)
	A0A017S4G0	Uncharacterized protein. (1692 aa)
	A0A017S4F2	RING finger membrane protein. (1611 aa)
	A0A017S430	RING-type domain-containing protein. (371 aa)
	A0A017S320	HORMA domain-containing protein. (725 aa)
	A0A017S2G5	Putative chromatin remodeling complex subunit. (1532 aa)
	A0A017S2D6	RBR-type E3 ubiquitin transferase. (514 aa)
	A0A017S2C1	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. (485 aa)
	A0A017S283	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (722 aa)
	A0A017S1C8	Uncharacterized protein. (675 aa)
	A0A017S1C3	Uncharacterized protein. (1155 aa)
	A0A017S0N2	E3 ubiquitin protein ligase. (726 aa)
	A0A017S0F1	Putative DNA repair protein Nse1. (339 aa)
	A0A017ST46	CDK-activating kinase assembly factor MAT1. (373 aa)
	A0A017SSV8	Putative 1-phosphatidylinositol-3-phosphate 5-kinase. (2424 aa)
	A0A017SSA5	RING and UBP finger domain protein. (719 aa)
	A0A017SS56	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1057 aa)
	A0A017SRN5	Uncharacterized protein. (1039 aa)
	A0A017SRL2	RING finger domain protein. (724 aa)
	A0A017SRC3	Putative ubiquitin ligase subunit HrtA. (119 aa)

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A017S0F1	A0A017SEG2	A0A017S0F1	A0A017SEG2	Putative DNA repair protein Nse1.	SP-RING-type domain-containing protein.	0.999
A0A017S0N2	A0A017S2C1	A0A017S0N2	A0A017S2C1	E3 ubiquitin protein ligase.	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	0.603
A0A017S0N2	A0A017S2G5	A0A017S0N2	A0A017S2G5	E3 ubiquitin protein ligase.	Putative chromatin remodeling complex subunit.	0.434
A0A017S0N2	A0A017SA58	A0A017S0N2	A0A017SA58	E3 ubiquitin protein ligase.	DWNN-domain-containing protein.	0.498
A0A017S0N2	A0A017SJP7	A0A017S0N2	A0A017SJP7	E3 ubiquitin protein ligase.	DNA repair protein rad18.	0.581
A0A017S1C3	A0A017SA50	A0A017S1C3	A0A017SA50	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.651
A0A017S1C3	A0A017SJZ4	A0A017S1C3	A0A017SJZ4	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A017S1C3	A0A017SPU9	A0A017S1C3	A0A017SPU9	Uncharacterized protein.	PHD-type domain-containing protein.	0.468
A0A017S1C8	A0A017S663	A0A017S1C8	A0A017S663	Uncharacterized protein.	Uncharacterized protein.	0.631
A0A017S1C8	A0A017S814	A0A017S1C8	A0A017S814	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A017S1C8	A0A017SDB4	A0A017S1C8	A0A017SDB4	Uncharacterized protein.	RING-type domain-containing protein.	0.400
A0A017S1C8	A0A017SJY1	A0A017S1C8	A0A017SJY1	Uncharacterized protein.	MIZ zinc finger protein.	0.659
A0A017S1C8	A0A017SN43	A0A017S1C8	A0A017SN43	Uncharacterized protein.	SP-RING-type domain-containing protein.	0.659
A0A017S1C8	A0A017SRC3	A0A017S1C8	A0A017SRC3	Uncharacterized protein.	Putative ubiquitin ligase subunit HrtA.	0.633
A0A017S283	A0A017S612	A0A017S283	A0A017S612	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	Uncharacterized protein.	0.535
A0A017S283	A0A017SLW8	A0A017S283	A0A017SLW8	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	U-box domain-containing protein.	0.415
A0A017S283	A0A017SRN5	A0A017S283	A0A017SRN5	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	Uncharacterized protein.	0.431
A0A017S283	A0A017SSV8	A0A017S283	A0A017SSV8	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	Putative 1-phosphatidylinositol-3-phosphate 5-kinase.	0.524
A0A017S2C1	A0A017S0N2	A0A017S2C1	A0A017S0N2	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	E3 ubiquitin protein ligase.	0.603
A0A017S2C1	A0A017S6S4	A0A017S2C1	A0A017S6S4	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	PHD domain-containing protein.	0.890