28 items (Sporothrix schenckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	U7PPZ5_SPOS1	Uncharacterized protein. (293 aa)
	U7PHX2_SPOS1	Uncharacterized protein; Belongs to the RNR ribonuclease family. (1032 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (181 aa)
	U7PKC8_SPOS1	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
	U7PKX0_SPOS1	Uncharacterized protein. (612 aa)
	U7PLE1_SPOS1	Uncharacterized protein. (171 aa)
	U7PM22_SPOS1	Uncharacterized protein. (413 aa)
	U7PN32_SPOS1	Nudix hydrolase domain-containing protein. (1165 aa)
	U7PNC1_SPOS1	Uncharacterized protein. (367 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (159 aa)
	U7PQ75_SPOS1	5'/3'-nucleotidase SurE. (900 aa)
	U7PQA0_SPOS1	Uncharacterized protein. (242 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (92 aa)
	U7PW71_SPOS1	RNB domain-containing protein. (1385 aa)
	U7PWJ4_SPOS1	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (590 aa)
	U7PX68_SPOS1	Uncharacterized protein. (2204 aa)
	U7PXF7_SPOS1	Cell differentiation protein rcd1. (380 aa)
	U7PYB5_SPOS1	Uncharacterized protein. (226 aa)
	U7Q0R4_SPOS1	Uncharacterized protein. (668 aa)
	U7Q1Y1_SPOS1	Protein VTS1. (623 aa)
	U7Q2C1_SPOS1	Uncharacterized protein. (581 aa)
	U7Q2N6_SPOS1	RPOL4c domain-containing protein. (142 aa)
	U7Q3W0_SPOS1	Uncharacterized protein. (346 aa)
	U7Q3Y8_SPOS1	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1492 aa)
	U7Q4S5_SPOS1	Uncharacterized protein. (647 aa)
	U7Q5R9_SPOS1	PAT1 domain-containing protein. (893 aa)
	U7Q6X0_SPOS1	Uncharacterized protein. (236 aa)
	U7Q7V2_SPOS1	Uncharacterized protein. (1798 aa)

Your Current Organism:

Sporothrix schenckii

NCBI taxonomy Id: 1391915
Other names: S. schenckii ATCC 58251, Sporothrix schenckii ATCC 58251

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM3	U7PJH4	U7PVM5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM1	LSM4	U7PJH4	U7PP05	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM1	U7PKC8_SPOS1	U7PJH4	U7PKC8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.974
LSM1	U7PKX0_SPOS1	U7PJH4	U7PKX0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.672
LSM1	U7PN32_SPOS1	U7PJH4	U7PN32	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Nudix hydrolase domain-containing protein.	0.899
LSM1	U7PNC1_SPOS1	U7PJH4	U7PNC1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.974
LSM1	U7PPZ5_SPOS1	U7PJH4	U7PPZ5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.899
LSM1	U7PQA0_SPOS1	U7PJH4	U7PQA0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.872
LSM1	U7PWJ4_SPOS1	U7PJH4	U7PWJ4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.996
LSM1	U7PX68_SPOS1	U7PJH4	U7PX68	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.499
LSM1	U7PYB5_SPOS1	U7PJH4	U7PYB5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.869
LSM1	U7Q0R4_SPOS1	U7PJH4	U7Q0R4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.574
LSM1	U7Q3Y8_SPOS1	U7PJH4	U7Q3Y8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.974
LSM1	U7Q4S5_SPOS1	U7PJH4	U7Q4S5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.485
LSM1	U7Q5R9_SPOS1	U7PJH4	U7Q5R9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	PAT1 domain-containing protein.	0.999
LSM3	LSM1	U7PVM5	U7PJH4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.999
LSM3	LSM4	U7PVM5	U7PP05	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	U7PKC8_SPOS1	U7PVM5	U7PKC8	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LSM3	U7PKX0_SPOS1	U7PVM5	U7PKX0	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.443
LSM3	U7PN32_SPOS1	U7PVM5	U7PN32	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nudix hydrolase domain-containing protein.	0.801