13 items (Sporothrix schenckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	U7PNY4_SPOS1	Uncharacterized protein. (1156 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (159 aa)
	U7PQK3_SPOS1	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	U7PRF3_SPOS1	Pre-mRNA-processing-splicing factor 8. (2896 aa)
	U7PS50_SPOS1	Uncharacterized protein. (254 aa)
	U7PSI7_SPOS1	Uncharacterized protein. (416 aa)
	U7PUF5_SPOS1	Nop domain-containing protein. (594 aa)
	U7PV50_SPOS1	RRM domain-containing protein. (207 aa)
	U7PXC1_SPOS1	Matrin-type domain-containing protein. (339 aa)
	U7Q1R2_SPOS1	Tr-type G domain-containing protein. (988 aa)
	U7Q264_SPOS1	Uncharacterized protein. (242 aa)
	U7Q4S2_SPOS1	RRM domain-containing protein. (433 aa)
	U7Q5D3_SPOS1	WD_REPEATS_REGION domain-containing protein. (561 aa)

Your Current Organism:

Sporothrix schenckii

NCBI taxonomy Id: 1391915
Other names: S. schenckii ATCC 58251, Sporothrix schenckii ATCC 58251

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	U7PNY4_SPOS1	U7PP05	U7PNY4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.990
LSM4	U7PQK3_SPOS1	U7PP05	U7PQK3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.949
LSM4	U7PRF3_SPOS1	U7PP05	U7PRF3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-processing-splicing factor 8.	0.963
LSM4	U7PS50_SPOS1	U7PP05	U7PS50	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.940
LSM4	U7PV50_SPOS1	U7PP05	U7PV50	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.837
LSM4	U7PXC1_SPOS1	U7PP05	U7PXC1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Matrin-type domain-containing protein.	0.856
LSM4	U7Q1R2_SPOS1	U7PP05	U7Q1R2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Tr-type G domain-containing protein.	0.950
LSM4	U7Q264_SPOS1	U7PP05	U7Q264	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.837
LSM4	U7Q4S2_SPOS1	U7PP05	U7Q4S2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.791
LSM4	U7Q5D3_SPOS1	U7PP05	U7Q5D3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	WD_REPEATS_REGION domain-containing protein.	0.970
U7PNY4_SPOS1	LSM4	U7PNY4	U7PP05	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
U7PNY4_SPOS1	U7PQK3_SPOS1	U7PNY4	U7PQK3	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.527
U7PNY4_SPOS1	U7PRF3_SPOS1	U7PNY4	U7PRF3	Uncharacterized protein.	Pre-mRNA-processing-splicing factor 8.	0.428
U7PNY4_SPOS1	U7PXC1_SPOS1	U7PNY4	U7PXC1	Uncharacterized protein.	Matrin-type domain-containing protein.	0.441
U7PNY4_SPOS1	U7Q1R2_SPOS1	U7PNY4	U7Q1R2	Uncharacterized protein.	Tr-type G domain-containing protein.	0.624
U7PNY4_SPOS1	U7Q5D3_SPOS1	U7PNY4	U7Q5D3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.827
U7PQK3_SPOS1	LSM4	U7PQK3	U7PP05	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.949
U7PQK3_SPOS1	U7PNY4_SPOS1	U7PQK3	U7PNY4	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Uncharacterized protein.	0.527
U7PQK3_SPOS1	U7PRF3_SPOS1	U7PQK3	U7PRF3	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Pre-mRNA-processing-splicing factor 8.	0.964
U7PQK3_SPOS1	U7PS50_SPOS1	U7PQK3	U7PS50	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Uncharacterized protein.	0.912