(8 nodes) Mixed, incl. K Homology domain, type 1, and Regulation of mRNA splicing, via spliceosome network (Aspergillus steynii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2FYI1	PolyC-binding proteins alphaCP-1. (362 aa)
	A0A2I2FZG3	RNA-binding domain-containing protein. (300 aa)
	A0A2I2FZV0	Zn(2)-C6 fungal-type domain-containing protein. (691 aa)
	A0A2I2G258	Uncharacterized protein. (158 aa)
	A0A2I2GI71	Rna-binding protein. (628 aa)
	A0A2I2GIK8	RNA-binding domain-containing protein. (150 aa)
	A0A2I2GRY5	KH domain RNA binding protein. (466 aa)
	A0A2I2GSR2	CSD_1 domain-containing protein. (834 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FYI1	A0A2I2FZG3	PolyC-binding proteins alphaCP-1.	RNA-binding domain-containing protein.	0.788
A0A2I2FYI1	A0A2I2FZV0	PolyC-binding proteins alphaCP-1.	Zn(2)-C6 fungal-type domain-containing protein.	0.795
A0A2I2FYI1	A0A2I2G258	PolyC-binding proteins alphaCP-1.	Uncharacterized protein.	0.641
A0A2I2FYI1	A0A2I2GI71	PolyC-binding proteins alphaCP-1.	Rna-binding protein.	0.637
A0A2I2FYI1	A0A2I2GIK8	PolyC-binding proteins alphaCP-1.	RNA-binding domain-containing protein.	0.744
A0A2I2FYI1	A0A2I2GSR2	PolyC-binding proteins alphaCP-1.	CSD_1 domain-containing protein.	0.604
A0A2I2FZG3	A0A2I2FYI1	RNA-binding domain-containing protein.	PolyC-binding proteins alphaCP-1.	0.788
A0A2I2FZG3	A0A2I2FZV0	RNA-binding domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.552
A0A2I2FZG3	A0A2I2G258	RNA-binding domain-containing protein.	Uncharacterized protein.	0.518
A0A2I2FZG3	A0A2I2GI71	RNA-binding domain-containing protein.	Rna-binding protein.	0.757
A0A2I2FZG3	A0A2I2GIK8	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.822
A0A2I2FZG3	A0A2I2GRY5	RNA-binding domain-containing protein.	KH domain RNA binding protein.	0.788
A0A2I2FZG3	A0A2I2GSR2	RNA-binding domain-containing protein.	CSD_1 domain-containing protein.	0.694
A0A2I2FZV0	A0A2I2FYI1	Zn(2)-C6 fungal-type domain-containing protein.	PolyC-binding proteins alphaCP-1.	0.795
A0A2I2FZV0	A0A2I2FZG3	Zn(2)-C6 fungal-type domain-containing protein.	RNA-binding domain-containing protein.	0.552
A0A2I2FZV0	A0A2I2G258	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.867
A0A2I2FZV0	A0A2I2GI71	Zn(2)-C6 fungal-type domain-containing protein.	Rna-binding protein.	0.636
A0A2I2FZV0	A0A2I2GIK8	Zn(2)-C6 fungal-type domain-containing protein.	RNA-binding domain-containing protein.	0.552
A0A2I2FZV0	A0A2I2GRY5	Zn(2)-C6 fungal-type domain-containing protein.	KH domain RNA binding protein.	0.795
A0A2I2FZV0	A0A2I2GSR2	Zn(2)-C6 fungal-type domain-containing protein.	CSD_1 domain-containing protein.	0.679