14 items (Aspergillus steynii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2GNN3	WD40 repeat-like protein. (617 aa)
	A0A2I2FTK4	Pre-rRNA-processing protein PNO1. (241 aa)
	A0A2I2FW23	18S rRNA biogenesis protein. (1131 aa)
	A0A2I2FX32	WD40 repeat-like protein. (959 aa)
	A0A2I2G1D3	Multiple RNA-binding domain-containing protein 1. (813 aa)
	A0A2I2G4D8	BING4CT-domain-containing protein. (536 aa)
	A0A2I2G9J6	Fcf2-domain-containing protein. (229 aa)
	A0A2I2GCZ7	Putative nucleolar protein. (551 aa)
	A0A2I2GE58	Nucleic acid-binding protein. (1816 aa)
	A0A2I2GGC7	Putative small nucleolar ribonucleo protein complex subunit. (900 aa)
	A0A2I2GK37	Nucleolar protein 58. (575 aa)
	A0A2I2GNN0	Putative small nucleolar ribonucleo protein complex subunit. (971 aa)
	A0A2I2GQQ8	Utp14-domain-containing protein. (969 aa)
	A0A2I2GSG6	DUF663-domain-containing protein. (1179 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FTK4	A0A2I2FW23	Pre-rRNA-processing protein PNO1.	18S rRNA biogenesis protein.	0.971
A0A2I2FTK4	A0A2I2FX32	Pre-rRNA-processing protein PNO1.	WD40 repeat-like protein.	0.938
A0A2I2FTK4	A0A2I2G1D3	Pre-rRNA-processing protein PNO1.	Multiple RNA-binding domain-containing protein 1.	0.618
A0A2I2FTK4	A0A2I2G4D8	Pre-rRNA-processing protein PNO1.	BING4CT-domain-containing protein.	0.957
A0A2I2FTK4	A0A2I2G9J6	Pre-rRNA-processing protein PNO1.	Fcf2-domain-containing protein.	0.957
A0A2I2FTK4	A0A2I2GCZ7	Pre-rRNA-processing protein PNO1.	Putative nucleolar protein.	0.951
A0A2I2FTK4	A0A2I2GE58	Pre-rRNA-processing protein PNO1.	Nucleic acid-binding protein.	0.939
A0A2I2FTK4	A0A2I2GGC7	Pre-rRNA-processing protein PNO1.	Putative small nucleolar ribonucleo protein complex subunit.	0.991
A0A2I2FTK4	A0A2I2GK37	Pre-rRNA-processing protein PNO1.	Nucleolar protein 58.	0.947
A0A2I2FTK4	A0A2I2GNN0	Pre-rRNA-processing protein PNO1.	Putative small nucleolar ribonucleo protein complex subunit.	0.943
A0A2I2FTK4	A0A2I2GNN3	Pre-rRNA-processing protein PNO1.	WD40 repeat-like protein.	0.954
A0A2I2FTK4	A0A2I2GQQ8	Pre-rRNA-processing protein PNO1.	Utp14-domain-containing protein.	0.948
A0A2I2FTK4	A0A2I2GSG6	Pre-rRNA-processing protein PNO1.	DUF663-domain-containing protein.	0.989
A0A2I2FW23	A0A2I2FTK4	18S rRNA biogenesis protein.	Pre-rRNA-processing protein PNO1.	0.971
A0A2I2FW23	A0A2I2FX32	18S rRNA biogenesis protein.	WD40 repeat-like protein.	0.986
A0A2I2FW23	A0A2I2G1D3	18S rRNA biogenesis protein.	Multiple RNA-binding domain-containing protein 1.	0.779
A0A2I2FW23	A0A2I2G4D8	18S rRNA biogenesis protein.	BING4CT-domain-containing protein.	0.981
A0A2I2FW23	A0A2I2G9J6	18S rRNA biogenesis protein.	Fcf2-domain-containing protein.	0.976
A0A2I2FW23	A0A2I2GCZ7	18S rRNA biogenesis protein.	Putative nucleolar protein.	0.990
A0A2I2FW23	A0A2I2GE58	18S rRNA biogenesis protein.	Nucleic acid-binding protein.	0.964