41 items (Aspergillus steynii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2GAP1	Putative U3 small nucleolar ribonucleo protein LCP5. (377 aa)
	A0A2I2G973	P-loop containing nucleoside triphosphate hydrolase protein. (1181 aa)
	A0A2I2G648	Fibrillarin. (317 aa)
	A0A2I2G1Y9	WD40 repeat-like protein. (447 aa)
	A0A2I2FSF1	Brix-domain-containing protein. (299 aa)
	A0A2I2FT41	Sas10 domain-containing protein. (643 aa)
	A0A2I2FU02	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (716 aa)
	A0A2I2FUH9	Fcf1-domain-containing protein. (523 aa)
	A0A2I2FV35	RNA helicase. (812 aa)
	A0A2I2FVJ7	SnoRNA binding protein. (1036 aa)
	A0A2I2FVS3	Putative rRNA maturation protein. (910 aa)
	A0A2I2FWL2	ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (468 aa)
	A0A2I2FX32	WD40 repeat-like protein. (959 aa)
	A0A2I2FX67	PPM-type phosphatase domain-containing protein. (1264 aa)
	A0A2I2FY36	WD40 repeat-like protein. (987 aa)
	A0A2I2FYX5	Putative small nucleolar ribonucleo protein complex subunit Utp15. (540 aa)
	A0A2I2G1C6	HMG box domain-containing protein. (322 aa)
	A0A2I2G1D3	Multiple RNA-binding domain-containing protein 1. (813 aa)
	A0A2I2G4D8	BING4CT-domain-containing protein. (536 aa)
	A0A2I2G4Z3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (360 aa)
	A0A2I2G604	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (290 aa)
	A0A2I2GRX3	WD40 repeat-like protein. (720 aa)
	A0A2I2GRA1	HEAT repeat protein. (2494 aa)
	A0A2I2GQQ8	Utp14-domain-containing protein. (969 aa)
	A0A2I2GNN3	WD40 repeat-like protein. (617 aa)
	A0A2I2GNN0	Putative small nucleolar ribonucleo protein complex subunit. (971 aa)
	A0A2I2GNA5	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (356 aa)
	A0A2I2GK37	Nucleolar protein 58. (575 aa)
	A0A2I2GJP1	Protein SIK1. (519 aa)
	A0A2I2GJL0	Uncharacterized protein. (395 aa)
	A0A2I2GJC9	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	A0A2I2GIR3	HAD_SAK_1 domain-containing protein. (625 aa)
	A0A2I2GGC7	Putative small nucleolar ribonucleo protein complex subunit. (900 aa)
	A0A2I2GFV2	U3 small nucleolar RNA-associated protein 22. (1066 aa)
	A0A2I2GFC3	Ribosomal protein S5. (197 aa)
	A0A2I2GE58	Nucleic acid-binding protein. (1816 aa)
	A0A2I2GCZ7	Putative nucleolar protein. (551 aa)
	A0A2I2G2I0	Putative U3 small nucleolar ribonucleo protein subunit. (188 aa)
	A0A2I2GC61	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	A0A2I2GC51	Small nucleolar ribonucleo protein complex subunit. (616 aa)
	A0A2I2G9M6	WD domain protein. (928 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FSF1	A0A2I2FT41	Brix-domain-containing protein.	Sas10 domain-containing protein.	0.986
A0A2I2FSF1	A0A2I2FU02	Brix-domain-containing protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.999
A0A2I2FSF1	A0A2I2FUH9	Brix-domain-containing protein.	Fcf1-domain-containing protein.	0.982
A0A2I2FSF1	A0A2I2FV35	Brix-domain-containing protein.	RNA helicase.	0.812
A0A2I2FSF1	A0A2I2FVJ7	Brix-domain-containing protein.	SnoRNA binding protein.	0.994
A0A2I2FSF1	A0A2I2FVS3	Brix-domain-containing protein.	Putative rRNA maturation protein.	0.979
A0A2I2FSF1	A0A2I2FWL2	Brix-domain-containing protein.	ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family.	0.865
A0A2I2FSF1	A0A2I2FX32	Brix-domain-containing protein.	WD40 repeat-like protein.	0.978
A0A2I2FSF1	A0A2I2FX67	Brix-domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.789
A0A2I2FSF1	A0A2I2FY36	Brix-domain-containing protein.	WD40 repeat-like protein.	0.996
A0A2I2FSF1	A0A2I2FYX5	Brix-domain-containing protein.	Putative small nucleolar ribonucleo protein complex subunit Utp15.	0.986
A0A2I2FSF1	A0A2I2G1D3	Brix-domain-containing protein.	Multiple RNA-binding domain-containing protein 1.	0.981
A0A2I2FSF1	A0A2I2G1Y9	Brix-domain-containing protein.	WD40 repeat-like protein.	0.977
A0A2I2FSF1	A0A2I2G2I0	Brix-domain-containing protein.	Putative U3 small nucleolar ribonucleo protein subunit.	0.999
A0A2I2FSF1	A0A2I2G4D8	Brix-domain-containing protein.	BING4CT-domain-containing protein.	0.986
A0A2I2FSF1	A0A2I2G4Z3	Brix-domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.982
A0A2I2FSF1	A0A2I2G604	Brix-domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.985
A0A2I2FSF1	A0A2I2G648	Brix-domain-containing protein.	Fibrillarin.	0.989
A0A2I2FSF1	A0A2I2G973	Brix-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.947
A0A2I2FSF1	A0A2I2G9M6	Brix-domain-containing protein.	WD domain protein.	0.994