(38 nodes) Ribosome assembly network (Aspergillus steynii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2FVR0	Uncharacterized protein. (378 aa)
	A0A2I2FWR2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	A0A2I2FX91	Ribosome biogenesis protein BRX1. (364 aa)
	A0A2I2FX99	F-box domain protein. (356 aa)
	A0A2I2FXE0	WD repeat protein. (515 aa)
	A0A2I2FYZ7	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (365 aa)
	A0A2I2G1D3	Multiple RNA-binding domain-containing protein 1. (813 aa)
	A0A2I2G1K7	40S ribosomal protein S19. (148 aa)
	A0A2I2G200	Putative ribosome biogenesis protein Ssf2. (450 aa)
	A0A2I2GHP3	40S ribosomal protein S27. (82 aa)
	A0A2I2GGC7	Putative small nucleolar ribonucleo protein complex subunit. (900 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
	A0A2I2GFX0	Ribosomal_L23eN domain-containing protein. (151 aa)
	A0A2I2GEG5	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	A0A2I2GK34	RNA helicase. (638 aa)
	A0A2I2GMW0	Ribosomal protein S28e. (68 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (299 aa)
	A0A2I2FTM3	Translational machinery component. (232 aa)
	A0A2I2GIQ1	Regulatory protein SUAPRGA1. (308 aa)
	A0A2I2GE58	Nucleic acid-binding protein. (1816 aa)
	A0A2I2G2Y4	37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (94 aa)
	A0A2I2G4T4	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4919 aa)
	A0A2I2G593	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	A0A2I2G5C2	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	A0A2I2G5K4	DEAD-domain-containing protein. (809 aa)
	A0A2I2GC19	Nop53-domain-containing protein. (729 aa)
	A0A2I2GB16	Shwachman-Bodian-diamond syndrome protein. (322 aa)
	A0A2I2G9N1	Ribosomal small subunit assembly protein. (311 aa)
	A0A2I2G5K6	Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	A0A2I2G7X9	Ribosomal protein L10e. (222 aa)
	A0A2I2G7X3	Eukaryotic translation initiation factor 5. (421 aa)
	A0A2I2G5P8	ANK_REP_REGION domain-containing protein. (517 aa)
	A0A2I2FT84	60S ribosomal protein L6. (200 aa)
	A0A2I2FSH0	Ribosomal_L18_c domain-containing protein. (300 aa)
	A0A2I2FRL5	60S ribosome biogenesis protein Sqt1. (512 aa)
	A0A2I2FRC3	Putative ribosome biogenesis GTPase Lsg1. (673 aa)
	A0A2I2FUI3	Ribosome assembly protein 1. (1081 aa)
	A0A2I2FUJ3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2I2FRC3	A0A2I2FRL5	A0A2I2FRC3	A0A2I2FRL5	Putative ribosome biogenesis GTPase Lsg1.	60S ribosome biogenesis protein Sqt1.	0.559
A0A2I2FRC3	A0A2I2FSH0	A0A2I2FRC3	A0A2I2FSH0	Putative ribosome biogenesis GTPase Lsg1.	Ribosomal_L18_c domain-containing protein.	0.933
A0A2I2FRC3	A0A2I2FT84	A0A2I2FRC3	A0A2I2FT84	Putative ribosome biogenesis GTPase Lsg1.	60S ribosomal protein L6.	0.895
A0A2I2FRC3	A0A2I2FUI3	A0A2I2FRC3	A0A2I2FUI3	Putative ribosome biogenesis GTPase Lsg1.	Ribosome assembly protein 1.	0.466
A0A2I2FRC3	A0A2I2FUJ3	A0A2I2FRC3	A0A2I2FUJ3	Putative ribosome biogenesis GTPase Lsg1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.902
A0A2I2FRC3	A0A2I2FWR2	A0A2I2FRC3	A0A2I2FWR2	Putative ribosome biogenesis GTPase Lsg1.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.892
A0A2I2FRC3	A0A2I2FX91	A0A2I2FRC3	A0A2I2FX91	Putative ribosome biogenesis GTPase Lsg1.	Ribosome biogenesis protein BRX1.	0.904
A0A2I2FRC3	A0A2I2FX99	A0A2I2FRC3	A0A2I2FX99	Putative ribosome biogenesis GTPase Lsg1.	F-box domain protein.	0.904
A0A2I2FRC3	A0A2I2FXE0	A0A2I2FRC3	A0A2I2FXE0	Putative ribosome biogenesis GTPase Lsg1.	WD repeat protein.	0.782
A0A2I2FRC3	A0A2I2FYZ7	A0A2I2FRC3	A0A2I2FYZ7	Putative ribosome biogenesis GTPase Lsg1.	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.625
A0A2I2FRC3	A0A2I2G1D3	A0A2I2FRC3	A0A2I2G1D3	Putative ribosome biogenesis GTPase Lsg1.	Multiple RNA-binding domain-containing protein 1.	0.614
A0A2I2FRC3	A0A2I2G200	A0A2I2FRC3	A0A2I2G200	Putative ribosome biogenesis GTPase Lsg1.	Putative ribosome biogenesis protein Ssf2.	0.818
A0A2I2FRC3	A0A2I2G4T4	A0A2I2FRC3	A0A2I2G4T4	Putative ribosome biogenesis GTPase Lsg1.	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.	0.513
A0A2I2FRC3	A0A2I2G5K4	A0A2I2FRC3	A0A2I2G5K4	Putative ribosome biogenesis GTPase Lsg1.	DEAD-domain-containing protein.	0.908
A0A2I2FRC3	A0A2I2G7X3	A0A2I2FRC3	A0A2I2G7X3	Putative ribosome biogenesis GTPase Lsg1.	Eukaryotic translation initiation factor 5.	0.509
A0A2I2FRC3	A0A2I2G7X9	A0A2I2FRC3	A0A2I2G7X9	Putative ribosome biogenesis GTPase Lsg1.	Ribosomal protein L10e.	0.930
A0A2I2FRC3	A0A2I2G9N1	A0A2I2FRC3	A0A2I2G9N1	Putative ribosome biogenesis GTPase Lsg1.	Ribosomal small subunit assembly protein.	0.521
A0A2I2FRC3	A0A2I2GB16	A0A2I2FRC3	A0A2I2GB16	Putative ribosome biogenesis GTPase Lsg1.	Shwachman-Bodian-diamond syndrome protein.	0.568
A0A2I2FRC3	A0A2I2GE58	A0A2I2FRC3	A0A2I2GE58	Putative ribosome biogenesis GTPase Lsg1.	Nucleic acid-binding protein.	0.861
A0A2I2FRC3	A0A2I2GEG5	A0A2I2FRC3	A0A2I2GEG5	Putative ribosome biogenesis GTPase Lsg1.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.882