11 items (Aspergillus steynii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2FX98	Uncharacterized protein. (172 aa)
	A0A2I2FYG6	Uncharacterized protein. (312 aa)
	A0A2I2G321	Serine/threonine-protein kinase RIO2. (417 aa)
	A0A2I2G4D2	Putative pre-rRNA processing protein Tsr1. (798 aa)
	A0A2I2GCZ7	Putative nucleolar protein. (551 aa)
	A0A2I2GNA2	RRM domain-containing protein. (468 aa)
	A0A2I2GRA1	HEAT repeat protein. (2494 aa)
	A0A2I2FRA7	Low-temperature viability protein ltv1. (480 aa)
	A0A2I2FT20	Uncharacterized protein. (326 aa)
	A0A2I2FVL9	Putative rRNA processing protein Bystin. (492 aa)
	A0A2I2FVS3	Putative rRNA maturation protein. (910 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FRA7	A0A2I2FT20	Low-temperature viability protein ltv1.	Uncharacterized protein.	0.773
A0A2I2FRA7	A0A2I2FVL9	Low-temperature viability protein ltv1.	Putative rRNA processing protein Bystin.	0.999
A0A2I2FRA7	A0A2I2FVS3	Low-temperature viability protein ltv1.	Putative rRNA maturation protein.	0.912
A0A2I2FRA7	A0A2I2G321	Low-temperature viability protein ltv1.	Serine/threonine-protein kinase RIO2.	0.998
A0A2I2FRA7	A0A2I2G4D2	Low-temperature viability protein ltv1.	Putative pre-rRNA processing protein Tsr1.	0.998
A0A2I2FRA7	A0A2I2GCZ7	Low-temperature viability protein ltv1.	Putative nucleolar protein.	0.860
A0A2I2FRA7	A0A2I2GNA2	Low-temperature viability protein ltv1.	RRM domain-containing protein.	0.874
A0A2I2FRA7	A0A2I2GRA1	Low-temperature viability protein ltv1.	HEAT repeat protein.	0.632
A0A2I2FT20	A0A2I2FRA7	Uncharacterized protein.	Low-temperature viability protein ltv1.	0.773
A0A2I2FT20	A0A2I2FVL9	Uncharacterized protein.	Putative rRNA processing protein Bystin.	0.826
A0A2I2FT20	A0A2I2FVS3	Uncharacterized protein.	Putative rRNA maturation protein.	0.829
A0A2I2FT20	A0A2I2FYG6	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A2I2FT20	A0A2I2G321	Uncharacterized protein.	Serine/threonine-protein kinase RIO2.	0.652
A0A2I2FT20	A0A2I2G4D2	Uncharacterized protein.	Putative pre-rRNA processing protein Tsr1.	0.775
A0A2I2FT20	A0A2I2GCZ7	Uncharacterized protein.	Putative nucleolar protein.	0.879
A0A2I2FT20	A0A2I2GNA2	Uncharacterized protein.	RRM domain-containing protein.	0.988
A0A2I2FT20	A0A2I2GRA1	Uncharacterized protein.	HEAT repeat protein.	0.739
A0A2I2FVL9	A0A2I2FRA7	Putative rRNA processing protein Bystin.	Low-temperature viability protein ltv1.	0.999
A0A2I2FVL9	A0A2I2FT20	Putative rRNA processing protein Bystin.	Uncharacterized protein.	0.826
A0A2I2FVL9	A0A2I2FVS3	Putative rRNA processing protein Bystin.	Putative rRNA maturation protein.	0.997