21 items (Aspergillus steynii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2G2E6	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (526 aa)
	A0A2I2GSG0	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (321 aa)
	A0A2I2GSB5	Tryptophan synthase. (724 aa)
	A0A2I2GS47	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (492 aa)
	A0A2I2GRN4	Tryptophan synthase. (639 aa)
	A0A2I2GNU9	Threonine dehydratase. (563 aa)
	A0A2I2GNQ0	Putative L-serine dehydratase. (450 aa)
	A0A2I2GKR0	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (375 aa)
	A0A2I2GHF2	Pyridoxal phosphate-dependent enzyme, beta subunit. (330 aa)
	A0A2I2GGW0	Pyridoxal phosphate-dependent enzyme, beta subunit. (371 aa)
	A0A2I2GGA2	Putative 1-aminocyclopropane-1-carboxylate deaminase. (402 aa)
	A0A2I2GCU1	Cysteine synthase. (440 aa)
	A0A2I2GCQ3	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (520 aa)
	A0A2I2GB13	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (523 aa)
	A0A2I2G898	Threonine synthase. (532 aa)
	A0A2I2G7L6	Uncharacterized protein. (1318 aa)
	A0A2I2G7B9	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (430 aa)
	A0A2I2G1U4	Putative L-serine dehydratase. (354 aa)
	A0A2I2FWL4	Tryptophan synthase. (692 aa)
	A0A2I2FTD6	Tryptophan synthase. (699 aa)
	A0A2I2FRP1	1-aminocyclopropane-1-carboxylate deaminase. (353 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FRP1	A0A2I2GGA2	1-aminocyclopropane-1-carboxylate deaminase.	Putative 1-aminocyclopropane-1-carboxylate deaminase.	0.762
A0A2I2FTD6	A0A2I2FWL4	Tryptophan synthase.	Tryptophan synthase.	0.997
A0A2I2FTD6	A0A2I2G1U4	Tryptophan synthase.	Putative L-serine dehydratase.	0.852
A0A2I2FTD6	A0A2I2G2E6	Tryptophan synthase.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.756
A0A2I2FTD6	A0A2I2G898	Tryptophan synthase.	Threonine synthase.	0.728
A0A2I2FTD6	A0A2I2GB13	Tryptophan synthase.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.997
A0A2I2FTD6	A0A2I2GCQ3	Tryptophan synthase.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.756
A0A2I2FTD6	A0A2I2GCU1	Tryptophan synthase.	Cysteine synthase.	0.756
A0A2I2FTD6	A0A2I2GGW0	Tryptophan synthase.	Pyridoxal phosphate-dependent enzyme, beta subunit.	0.756
A0A2I2FTD6	A0A2I2GHF2	Tryptophan synthase.	Pyridoxal phosphate-dependent enzyme, beta subunit.	0.756
A0A2I2FTD6	A0A2I2GKR0	Tryptophan synthase.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.854
A0A2I2FTD6	A0A2I2GNQ0	Tryptophan synthase.	Putative L-serine dehydratase.	0.852
A0A2I2FTD6	A0A2I2GNU9	Tryptophan synthase.	Threonine dehydratase.	0.852
A0A2I2FTD6	A0A2I2GRN4	Tryptophan synthase.	Tryptophan synthase.	0.997
A0A2I2FTD6	A0A2I2GS47	Tryptophan synthase.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.756
A0A2I2FTD6	A0A2I2GSB5	Tryptophan synthase.	Tryptophan synthase.	0.997
A0A2I2FTD6	A0A2I2GSG0	Tryptophan synthase.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.854
A0A2I2FWL4	A0A2I2FTD6	Tryptophan synthase.	Tryptophan synthase.	0.997
A0A2I2FWL4	A0A2I2G1U4	Tryptophan synthase.	Putative L-serine dehydratase.	0.936
A0A2I2FWL4	A0A2I2G2E6	Tryptophan synthase.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.884