(6 nodes) K Homology domain, type 1 network (Aspergillus steynii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2GNJ8	KH domain-containing protein. (524 aa)
	A0A2I2GRX6	Uncharacterized protein. (1295 aa)
	A0A2I2GSF6	Uncharacterized protein. (1003 aa)
	A0A2I2GRY5	KH domain RNA binding protein. (466 aa)
	A0A2I2FYI1	PolyC-binding proteins alphaCP-1. (362 aa)
	A0A2I2FYM5	Exosome complex exonuclease Rrp40. (278 aa)

Your Current Organism:

Aspergillus steynii

NCBI taxonomy Id: 1392250
Other names: A. steynii IBT 23096, Aspergillus steynii IBT 23096

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2FYI1	A0A2I2GRX6	PolyC-binding proteins alphaCP-1.	Uncharacterized protein.	0.472
A0A2I2FYI1	A0A2I2GSF6	PolyC-binding proteins alphaCP-1.	Uncharacterized protein.	0.439
A0A2I2GRX6	A0A2I2FYI1	Uncharacterized protein.	PolyC-binding proteins alphaCP-1.	0.472
A0A2I2GRX6	A0A2I2GRY5	Uncharacterized protein.	KH domain RNA binding protein.	0.472
A0A2I2GRY5	A0A2I2GRX6	KH domain RNA binding protein.	Uncharacterized protein.	0.472
A0A2I2GRY5	A0A2I2GSF6	KH domain RNA binding protein.	Uncharacterized protein.	0.439
A0A2I2GSF6	A0A2I2FYI1	Uncharacterized protein.	PolyC-binding proteins alphaCP-1.	0.439
A0A2I2GSF6	A0A2I2GRY5	Uncharacterized protein.	KH domain RNA binding protein.	0.439