9 items (Aspergillus novofumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
	A0A2I1C0F5	Uncharacterized protein. (365 aa)
	A0A2I1C8F2	U6 snRNA-associated Sm-like protein LSm7. (138 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A2I1CDQ9	U6 snRNA-associated Sm-like protein LSm6. (75 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	A0A2I1CKE0	Putative pre-mRNA splicing factor. (1305 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
	A0A2I1CP04	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)

Your Current Organism:

Aspergillus novofumigatus

NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2I1C0F5	A0A2I1C8F2	A0A2I1C0F5	A0A2I1C8F2	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm7.	0.988
A0A2I1C0F5	A0A2I1CDQ9	A0A2I1C0F5	A0A2I1CDQ9	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm6.	0.989
A0A2I1C0F5	A0A2I1CKE0	A0A2I1C0F5	A0A2I1CKE0	Uncharacterized protein.	Putative pre-mRNA splicing factor.	0.945
A0A2I1C0F5	LSM3	A0A2I1C0F5	A0A2I1CIU9	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.992
A0A2I1C0F5	LSM4	A0A2I1C0F5	A0A2I1CN05	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.987
A0A2I1C0F5	LSM5	A0A2I1C0F5	A0A2I1BZN0	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.987
A0A2I1C0F5	LSM8	A0A2I1C0F5	A0A2I1C9C7	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.986
A0A2I1C8F2	A0A2I1C0F5	A0A2I1C8F2	A0A2I1C0F5	U6 snRNA-associated Sm-like protein LSm7.	Uncharacterized protein.	0.988
A0A2I1C8F2	A0A2I1CDQ9	A0A2I1C8F2	A0A2I1CDQ9	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm6.	0.999
A0A2I1C8F2	A0A2I1CKE0	A0A2I1C8F2	A0A2I1CKE0	U6 snRNA-associated Sm-like protein LSm7.	Putative pre-mRNA splicing factor.	0.984
A0A2I1C8F2	A0A2I1CP04	A0A2I1C8F2	A0A2I1CP04	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A2I1C8F2	LSM3	A0A2I1C8F2	A0A2I1CIU9	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
A0A2I1C8F2	LSM4	A0A2I1C8F2	A0A2I1CN05	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
A0A2I1C8F2	LSM5	A0A2I1C8F2	A0A2I1BZN0	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.998
A0A2I1C8F2	LSM8	A0A2I1C8F2	A0A2I1C9C7	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
A0A2I1CDQ9	A0A2I1C0F5	A0A2I1CDQ9	A0A2I1C0F5	U6 snRNA-associated Sm-like protein LSm6.	Uncharacterized protein.	0.989
A0A2I1CDQ9	A0A2I1C8F2	A0A2I1CDQ9	A0A2I1C8F2	U6 snRNA-associated Sm-like protein LSm6.	U6 snRNA-associated Sm-like protein LSm7.	0.999
A0A2I1CDQ9	A0A2I1CKE0	A0A2I1CDQ9	A0A2I1CKE0	U6 snRNA-associated Sm-like protein LSm6.	Putative pre-mRNA splicing factor.	0.983
A0A2I1CDQ9	A0A2I1CP04	A0A2I1CDQ9	A0A2I1CP04	U6 snRNA-associated Sm-like protein LSm6.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A2I1CDQ9	LSM3	A0A2I1CDQ9	A0A2I1CIU9	U6 snRNA-associated Sm-like protein LSm6.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999