8 items (Aspergillus novofumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I1C7X3	OMPdecase domain-containing protein. (451 aa)
	A0A2I1CPV7	Zn(2)-C6 fungal-type domain-containing protein. (655 aa)
	A0A2I1CMT8	Orotate phosphoribosyltransferase. (246 aa)
	A0A2I1CMR3	Putative dihydroorotate reductase pyre. (515 aa)
	A0A2I1CM15	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (286 aa)
	A0A2I1CC80	Putative bifunctional pyrimidine biosynthesis protein. (2255 aa)
	A0A2I1BXB9	Dihydroorotase, homodimeric type. (360 aa)
	A0A2I1BSN6	Fungal_trans domain-containing protein. (542 aa)

Your Current Organism:

Aspergillus novofumigatus

NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I1BSN6	A0A2I1BXB9	Fungal_trans domain-containing protein.	Dihydroorotase, homodimeric type.	0.623
A0A2I1BSN6	A0A2I1CC80	Fungal_trans domain-containing protein.	Putative bifunctional pyrimidine biosynthesis protein.	0.766
A0A2I1BSN6	A0A2I1CMR3	Fungal_trans domain-containing protein.	Putative dihydroorotate reductase pyre.	0.939
A0A2I1BSN6	A0A2I1CMT8	Fungal_trans domain-containing protein.	Orotate phosphoribosyltransferase.	0.732
A0A2I1BXB9	A0A2I1BSN6	Dihydroorotase, homodimeric type.	Fungal_trans domain-containing protein.	0.623
A0A2I1BXB9	A0A2I1C7X3	Dihydroorotase, homodimeric type.	OMPdecase domain-containing protein.	0.677
A0A2I1BXB9	A0A2I1CC80	Dihydroorotase, homodimeric type.	Putative bifunctional pyrimidine biosynthesis protein.	0.973
A0A2I1BXB9	A0A2I1CM15	Dihydroorotase, homodimeric type.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.677
A0A2I1BXB9	A0A2I1CMR3	Dihydroorotase, homodimeric type.	Putative dihydroorotate reductase pyre.	0.993
A0A2I1BXB9	A0A2I1CMT8	Dihydroorotase, homodimeric type.	Orotate phosphoribosyltransferase.	0.774
A0A2I1BXB9	A0A2I1CPV7	Dihydroorotase, homodimeric type.	Zn(2)-C6 fungal-type domain-containing protein.	0.582
A0A2I1C7X3	A0A2I1BXB9	OMPdecase domain-containing protein.	Dihydroorotase, homodimeric type.	0.677
A0A2I1C7X3	A0A2I1CC80	OMPdecase domain-containing protein.	Putative bifunctional pyrimidine biosynthesis protein.	0.768
A0A2I1C7X3	A0A2I1CMR3	OMPdecase domain-containing protein.	Putative dihydroorotate reductase pyre.	0.942
A0A2I1C7X3	A0A2I1CMT8	OMPdecase domain-containing protein.	Orotate phosphoribosyltransferase.	0.893
A0A2I1CC80	A0A2I1BSN6	Putative bifunctional pyrimidine biosynthesis protein.	Fungal_trans domain-containing protein.	0.766
A0A2I1CC80	A0A2I1BXB9	Putative bifunctional pyrimidine biosynthesis protein.	Dihydroorotase, homodimeric type.	0.973
A0A2I1CC80	A0A2I1C7X3	Putative bifunctional pyrimidine biosynthesis protein.	OMPdecase domain-containing protein.	0.768
A0A2I1CC80	A0A2I1CM15	Putative bifunctional pyrimidine biosynthesis protein.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.768
A0A2I1CC80	A0A2I1CMR3	Putative bifunctional pyrimidine biosynthesis protein.	Putative dihydroorotate reductase pyre.	0.964