71 items (Aspergillus novofumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I1BUX7	Uncharacterized protein. (104 aa)
	A0A2I1BVU1	PCI domain-containing protein. (455 aa)
	A0A2I1BVY1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (734 aa)
	A0A2I1BWF0	Putative endoplasmic reticulum and nuclear membrane proteinc Npl4. (603 aa)
	A0A2I1BZ28	Putative mRNA transport regulator. (977 aa)
	A0A2I1BZ55	Putative non-repetitive nucleoporin. (1357 aa)
	A0A2I1BZ78	Uncharacterized protein. (289 aa)
	A0A2I1C1P3	Putative ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (449 aa)
	A0A2I1C1S2	U3 small nucleolar RNA-associated protein 22. (1071 aa)
	A0A2I1C1U9	Uncharacterized protein. (652 aa)
	A0A2I1C1V8	Putative nuclear envelope pore membrane protein. (1254 aa)
	A0A2I1C1X5	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1406 aa)
	A0A2I1C2U9	Xpo1 domain-containing protein. (1230 aa)
	A0A2I1C3H2	SMAD/FHA domain-containing protein. (319 aa)
	A0A2I1C4M2	WD repeat-containing protein. (375 aa)
	A0A2I1C4X0	Peptidase S59 domain-containing protein. (1914 aa)
	A0A2I1C504	Putative ubiquitin-protein ligase. (4041 aa)
	A0A2I1C5T1	Putative nuclear transport factor 2. (162 aa)
	A0A2I1C656	Uncharacterized protein. (652 aa)
	A0A2I1C6C8	Protein transport protein sec13; Belongs to the WD repeat SEC13 family. (309 aa)
	A0A2I1C6G1	Putative Nup133 nucleoporin. (1340 aa)
	A0A2I1C6K1	Putative nuclear pore protein. (1048 aa)
	A0A2I1C6M8	Putative THO complex subunit Tho1. (672 aa)
	A0A2I1C7P1	Uncharacterized protein. (221 aa)
	A0A2I1C8Y3	Putative nucleoporin. (1800 aa)
	A0A2I1C927	Putative transcriptional elongation factor Iws1. (452 aa)
	A0A2I1C944	Nup54 domain-containing protein. (483 aa)
	A0A2I1C9B1	Putative RNA export mediator Gle1. (524 aa)
	A0A2I1C9G9	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1051 aa)
	A0A2I1C9R5	Putative 26 proteasome complex subunit Sem1. (83 aa)
	A0A2I1C9S1	Uncharacterized protein. (1313 aa)
	A0A2I1C9T4	Kinase family protein. (784 aa)
	A0A2I1CA09	Putative nuclear pore complex protein. (363 aa)
	A0A2I1CAG7	Putative importin beta-3 subunit. (1095 aa)
	A0A2I1CAR6	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (266 aa)
	A0A2I1CAW3	mRNA export factor mex67. (662 aa)
	A0A2I1CAY2	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (94 aa)
	A0A2I1CBE5	Uncharacterized protein. (631 aa)
	A0A2I1CBV3	RNA-binding domain-containing protein. (465 aa)
	A0A2I1CC53	Putative mitochondrial import receptor subunit. (169 aa)
	A0A2I1CCB1	Uncharacterized protein. (475 aa)
	A0A2I1CDB9	Putative C3HC zinc finger protein. (460 aa)
	A0A2I1CDG8	Uncharacterized protein. (212 aa)
	A0A2I1CDS4	Cap binding protein. (832 aa)
	A0A2I1CDZ9	Uncharacterized protein. (190 aa)
	A0A2I1CE62	Putative chromosome segregation protein Cse1. (962 aa)
	A0A2I1CE88	Putative mRNA-nucleus export ATPase. (1124 aa)
	A0A2I1CEM4	Putative ATP dependent RNA helicase. (463 aa)
	A0A2I1CFS4	Putative R3H domain protein. (607 aa)
	A0A2I1CH56	Tho2 protein. (2464 aa)
	A0A2I1CHF1	Uncharacterized protein. (560 aa)
	A0A2I1CHJ6	RNA binding domain protein. (352 aa)
	A0A2I1CHW3	Uncharacterized protein. (892 aa)
	A0A2I1CHX8	Putative nuclear pore complex component. (266 aa)
	A0A2I1CHY0	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1029 aa)
	A0A2I1CIP3	Putative Ran-specific GTPase-activating protein 1. (473 aa)
	A0A2I1CIQ0	Uncharacterized protein. (808 aa)
	A0A2I1CIV8	Putative nuclear pore complex subunit Nup192. (1665 aa)
	A0A2I1CJ82	RRM domain-containing protein. (250 aa)
	A0A2I1CK62	Putative ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (489 aa)
	A0A2I1CKG7	C3H1-type domain-containing protein. (545 aa)
	A0A2I1CKH5	ELYS domain-containing protein. (318 aa)
	A0A2I1CKV1	Nsp1_C domain-containing protein. (663 aa)
	A0A2I1CLB3	Putative nuclear pore complex subunit Nup159. (1443 aa)
	A0A2I1CLY8	Uncharacterized protein. (337 aa)
	A0A2I1CM35	Uncharacterized protein. (885 aa)
	A0A2I1CM40	Nuclear cap-binding protein subunit 2. (196 aa)
	A0A2I1CMP6	Putative nuclear protein export protein Yrb2. (503 aa)
	A0A2I1CMS7	Putative nuclear pore protein; Belongs to the WD repeat SEC13 family. (376 aa)
	A0A2I1CNK2	Putative SAP domain protein. (301 aa)
	A0A2I1CNK7	Uncharacterized protein. (638 aa)

Your Current Organism:

Aspergillus novofumigatus

NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I1BUX7	A0A2I1C1P3	Uncharacterized protein.	Putative ATP dependent RNA helicase; Belongs to the DEAD box helicase family.	0.554
A0A2I1BUX7	A0A2I1C4M2	Uncharacterized protein.	WD repeat-containing protein.	0.764
A0A2I1BUX7	A0A2I1C5T1	Uncharacterized protein.	Putative nuclear transport factor 2.	0.434
A0A2I1BUX7	A0A2I1C6M8	Uncharacterized protein.	Putative THO complex subunit Tho1.	0.877
A0A2I1BUX7	A0A2I1CAW3	Uncharacterized protein.	mRNA export factor mex67.	0.618
A0A2I1BUX7	A0A2I1CDG8	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A2I1BUX7	A0A2I1CDS4	Uncharacterized protein.	Cap binding protein.	0.692
A0A2I1BUX7	A0A2I1CEM4	Uncharacterized protein.	Putative ATP dependent RNA helicase.	0.980
A0A2I1BUX7	A0A2I1CFS4	Uncharacterized protein.	Putative R3H domain protein.	0.505
A0A2I1BUX7	A0A2I1CHF1	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A2I1BUX7	A0A2I1CHJ6	Uncharacterized protein.	RNA binding domain protein.	0.841
A0A2I1BUX7	A0A2I1CJ82	Uncharacterized protein.	RRM domain-containing protein.	0.841
A0A2I1BUX7	A0A2I1CLY8	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A2I1BUX7	A0A2I1CM40	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.677
A0A2I1BVU1	A0A2I1C944	PCI domain-containing protein.	Nup54 domain-containing protein.	0.420
A0A2I1BVU1	A0A2I1C9R5	PCI domain-containing protein.	Putative 26 proteasome complex subunit Sem1.	0.971
A0A2I1BVU1	A0A2I1CA09	PCI domain-containing protein.	Putative nuclear pore complex protein.	0.520
A0A2I1BVU1	A0A2I1CAW3	PCI domain-containing protein.	mRNA export factor mex67.	0.558
A0A2I1BVU1	A0A2I1CDG8	PCI domain-containing protein.	Uncharacterized protein.	0.459
A0A2I1BVU1	A0A2I1CEM4	PCI domain-containing protein.	Putative ATP dependent RNA helicase.	0.532