21 items (Aspergillus novofumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I1CM52	Nuclear distribution protein nude. (598 aa)
	A0A2I1BY79	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1132 aa)
	A0A2I1C015	Putative Noc1p protein. (679 aa)
	A0A2I1C3G6	Ubiquitin/40S ribosomal protein S27a fusion. (154 aa)
	A0A2I1C3M9	EB1 domain protein. (247 aa)
	A0A2I1C509	Putative polyubiquitin. (305 aa)
	A0A2I1C5U6	Uncharacterized protein. (829 aa)
	A0A2I1C6D2	BZIP domain-containing protein. (289 aa)
	A0A2I1C8N0	M protein repeat protein. (732 aa)
	A0A2I1C9G6	UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family. (423 aa)
	A0A2I1CA39	Uncharacterized protein. (258 aa)
	A0A2I1CA60	Mif2_N domain-containing protein. (444 aa)
	A0A2I1CB69	Metallo-dependent phosphatase. (335 aa)
	A0A2I1CBK4	Putative spindle pole body component. (922 aa)
	A0A2I1CE53	Mis6 domain protein. (736 aa)
	A0A2I1CHL9	Ser/Thr protein phosphatase family. (420 aa)
	A0A2I1CHM3	Uncharacterized protein. (484 aa)
	A0A2I1CHZ8	Putative separin. (2119 aa)
	A0A2I1CIJ6	Kinetochore protein nuf2. (463 aa)
	A0A2I1CKH5	ELYS domain-containing protein. (318 aa)
	A0A2I1CKT8	Kinesin family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1011 aa)

Your Current Organism:

Aspergillus novofumigatus

NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I1BY79	A0A2I1C9G6	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.509
A0A2I1BY79	A0A2I1CKH5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	ELYS domain-containing protein.	0.986
A0A2I1C015	A0A2I1C3G6	Putative Noc1p protein.	Ubiquitin/40S ribosomal protein S27a fusion.	0.598
A0A2I1C015	A0A2I1C3M9	Putative Noc1p protein.	EB1 domain protein.	0.971
A0A2I1C015	A0A2I1C509	Putative Noc1p protein.	Putative polyubiquitin.	0.530
A0A2I1C015	A0A2I1C6D2	Putative Noc1p protein.	BZIP domain-containing protein.	0.598
A0A2I1C015	A0A2I1CBK4	Putative Noc1p protein.	Putative spindle pole body component.	0.902
A0A2I1C015	A0A2I1CE53	Putative Noc1p protein.	Mis6 domain protein.	0.456
A0A2I1C015	A0A2I1CKT8	Putative Noc1p protein.	Kinesin family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.728
A0A2I1C3G6	A0A2I1C015	Ubiquitin/40S ribosomal protein S27a fusion.	Putative Noc1p protein.	0.598
A0A2I1C3G6	A0A2I1C509	Ubiquitin/40S ribosomal protein S27a fusion.	Putative polyubiquitin.	0.973
A0A2I1C3G6	A0A2I1C9G6	Ubiquitin/40S ribosomal protein S27a fusion.	UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.921
A0A2I1C3G6	A0A2I1CB69	Ubiquitin/40S ribosomal protein S27a fusion.	Metallo-dependent phosphatase.	0.651
A0A2I1C3G6	A0A2I1CHL9	Ubiquitin/40S ribosomal protein S27a fusion.	Ser/Thr protein phosphatase family.	0.651
A0A2I1C3G6	A0A2I1CHZ8	Ubiquitin/40S ribosomal protein S27a fusion.	Putative separin.	0.645
A0A2I1C3G6	A0A2I1CKT8	Ubiquitin/40S ribosomal protein S27a fusion.	Kinesin family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.415
A0A2I1C3M9	A0A2I1C015	EB1 domain protein.	Putative Noc1p protein.	0.971
A0A2I1C3M9	A0A2I1C8N0	EB1 domain protein.	M protein repeat protein.	0.576
A0A2I1C3M9	A0A2I1CBK4	EB1 domain protein.	Putative spindle pole body component.	0.971
A0A2I1C3M9	A0A2I1CE53	EB1 domain protein.	Mis6 domain protein.	0.811