STRINGSTRING
A0A2I1CP04 A0A2I1CP04 LSM5 LSM5 A0A2I1C0F5 A0A2I1C0F5 A0A2I1C1P3 A0A2I1C1P3 A0A2I1C6Y4 A0A2I1C6Y4 A0A2I1C8F2 A0A2I1C8F2 A0A2I1CDQ9 A0A2I1CDQ9 A0A2I1CHE5 A0A2I1CHE5 A0A2I1CIC7 A0A2I1CIC7 A0A2I1CIT2 A0A2I1CIT2 LSM3 LSM3 LSM1 LSM1 LSM4 LSM4 A0A2I1CN10 A0A2I1CN10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2I1CP04U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A2I1C0F5Uncharacterized protein. (365 aa)
A0A2I1C1P3Putative ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (449 aa)
A0A2I1C6Y4Uncharacterized protein. (296 aa)
A0A2I1C8F2U6 snRNA-associated Sm-like protein LSm7. (138 aa)
A0A2I1CDQ9U6 snRNA-associated Sm-like protein LSm6. (75 aa)
A0A2I1CHE5Putative decapping enzyme Dcp1. (319 aa)
A0A2I1CIC7Putative topoisomerase II associated protein. (810 aa)
A0A2I1CIT2Putative decapping enzyme Dcp2. (834 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (177 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
A0A2I1CN10Uncharacterized protein. (216 aa)
Your Current Organism:
Aspergillus novofumigatus
NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806
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