47 items (Aspergillus novofumigatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I1C225	DNA polymerase. (1679 aa)
	A0A2I1BSY8	FAD/NAD(P)-binding domain-containing protein. (532 aa)
	A0A2I1BTL5	Uncharacterized protein. (371 aa)
	A0A2I1BUF1	Uncharacterized protein. (319 aa)
	A0A2I1BUV6	Uncharacterized protein. (190 aa)
	A0A2I1BXB2	Uncharacterized protein. (1054 aa)
	A0A2I1BYF1	Putative DNA-directed polymerase kappa. (617 aa)
	A0A2I1BYU2	Putative AAA family ATPase. (644 aa)
	A0A2I1BZ68	AAA domain-containing protein. (1018 aa)
	A0A2I1C0W4	Uncharacterized protein. (101 aa)
	A0A2I1C3G6	Ubiquitin/40S ribosomal protein S27a fusion. (154 aa)
	A0A2I1C4B3	TPR domain protein. (469 aa)
	A0A2I1C4D4	Ubiquitin carboxyl-terminal hydrolase. (741 aa)
	A0A2I1C4W3	Putative DNA polymerase iota. (596 aa)
	A0A2I1C509	Putative polyubiquitin. (305 aa)
	A0A2I1C6D2	BZIP domain-containing protein. (289 aa)
	A0A2I1C6J0	Putative AAA family ATPase. (760 aa)
	A0A2I1C7F8	Uncharacterized protein. (139 aa)
	A0A2I1C907	Uncharacterized protein. (130 aa)
	A0A2I1CA16	Uncharacterized protein. (756 aa)
	A0A2I1CAB2	Ubiquitin carboxyl-terminal hydrolase. (866 aa)
	A0A2I1CAQ5	Uncharacterized protein. (717 aa)
	A0A2I1CAW6	Uncharacterized protein. (145 aa)
	A0A2I1CBB9	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	A0A2I1CBY3	Uncharacterized protein. (94 aa)
	A0A2I1CC94	Putative UV-damaged DNA binding protein. (1140 aa)
	A0A2I1CCG1	Putative DNA polymerase delta subunit 4. (193 aa)
	A0A2I1CD08	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1157 aa)
	A0A2I1CD83	Putative telomere silencing protein Zds1. (842 aa)
	A0A2I1CFX1	CHY-type domain-containing protein. (122 aa)
	A0A2I1CGM5	Putative ubiquitin ligase subunit HrtA. (109 aa)
	A0A2I1CHT4	Putative sister chromatid cohesion protein. (656 aa)
	A0A2I1CI93	Putative CBF/NF-Y family transcription factor. (190 aa)
	A0A2I1CIL6	WD repeat protein. (1033 aa)
	A0A2I1CIV1	Putative ubiquitin ligase subunit CulD; Belongs to the cullin family. (896 aa)
	A0A2I1CIZ0	Uncharacterized protein. (153 aa)
	A0A2I1CJZ2	Uncharacterized protein. (164 aa)
	A0A2I1CL50	CHY zinc finger domain protein. (818 aa)
	A0A2I1CL94	Putative ubiquitin C-terminal hydrolase. (1108 aa)
	A0A2I1CLM9	Uncharacterized protein. (1044 aa)
	A0A2I1CLR5	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (603 aa)
	A0A2I1CLX6	BRCT domain-containing protein. (279 aa)
	A0A2I1CNM0	Putative ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. (1597 aa)
	A0A2I1CP74	Putative mitotic spindle checkpoint protein. (277 aa)
	A0A2I1CP95	WD domain protein. (718 aa)
	A0A2I1CPJ1	Putative DNA repair protein. (418 aa)
	A0A2I1CPJ8	Uncharacterized protein. (444 aa)

Your Current Organism:

Aspergillus novofumigatus

NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I1BSY8	A0A2I1C509	FAD/NAD(P)-binding domain-containing protein.	Putative polyubiquitin.	0.485
A0A2I1BSY8	A0A2I1CLR5	FAD/NAD(P)-binding domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.766
A0A2I1BTL5	A0A2I1C509	Uncharacterized protein.	Putative polyubiquitin.	0.485
A0A2I1BTL5	A0A2I1CLR5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.766
A0A2I1BUF1	A0A2I1C509	Uncharacterized protein.	Putative polyubiquitin.	0.485
A0A2I1BUF1	A0A2I1CLR5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.766
A0A2I1BUV6	A0A2I1C509	Uncharacterized protein.	Putative polyubiquitin.	0.485
A0A2I1BUV6	A0A2I1CLR5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.766
A0A2I1BXB2	A0A2I1C3G6	Uncharacterized protein.	Ubiquitin/40S ribosomal protein S27a fusion.	0.756
A0A2I1BXB2	A0A2I1C509	Uncharacterized protein.	Putative polyubiquitin.	0.817
A0A2I1BXB2	A0A2I1C6D2	Uncharacterized protein.	BZIP domain-containing protein.	0.756
A0A2I1BXB2	A0A2I1CGM5	Uncharacterized protein.	Putative ubiquitin ligase subunit HrtA.	0.684
A0A2I1BXB2	A0A2I1CHT4	Uncharacterized protein.	Putative sister chromatid cohesion protein.	0.663
A0A2I1BXB2	A0A2I1CLR5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.626
A0A2I1BYF1	A0A2I1C225	Putative DNA-directed polymerase kappa.	DNA polymerase.	0.907
A0A2I1BYF1	A0A2I1C3G6	Putative DNA-directed polymerase kappa.	Ubiquitin/40S ribosomal protein S27a fusion.	0.778
A0A2I1BYF1	A0A2I1C4W3	Putative DNA-directed polymerase kappa.	Putative DNA polymerase iota.	0.774
A0A2I1BYF1	A0A2I1C509	Putative DNA-directed polymerase kappa.	Putative polyubiquitin.	0.788
A0A2I1BYF1	A0A2I1C6D2	Putative DNA-directed polymerase kappa.	BZIP domain-containing protein.	0.778
A0A2I1BYF1	A0A2I1CA16	Putative DNA-directed polymerase kappa.	Uncharacterized protein.	0.619