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A0A2I1C526 A0A2I1C526 A0A2I1BZ33 A0A2I1BZ33 A0A2I1C5Y6 A0A2I1C5Y6 A0A2I1C047 A0A2I1C047 A0A2I1CP40 A0A2I1CP40 A0A2I1CP04 A0A2I1CP04 LSM4 LSM4 LSM1 LSM1 A0A2I1CLD5 A0A2I1CLD5 A0A2I1CIY3 A0A2I1CIY3 LSM3 LSM3 A0A2I1CDQ9 A0A2I1CDQ9 LSM8 LSM8 LSM5 LSM5 A0A2I1C8F2 A0A2I1C8F2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2I1C526Small nuclear ribonucleoprotein Sm D3. (116 aa)
A0A2I1BZ33Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
A0A2I1C5Y6Sm-like ribonucleo protein. (218 aa)
A0A2I1C047Small nuclear ribonucleoprotein G. (78 aa)
A0A2I1CP40Putative small nuclear ribonucleo protein SmF. (88 aa)
A0A2I1CP04U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (177 aa)
A0A2I1CLD5Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (151 aa)
A0A2I1CIY3Small nuclear ribonucleoprotein Sm D2. (97 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A2I1CDQ9U6 snRNA-associated Sm-like protein LSm6. (75 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A2I1C8F2U6 snRNA-associated Sm-like protein LSm7. (138 aa)
Your Current Organism:
Aspergillus novofumigatus
NCBI taxonomy Id: 1392255
Other names: A. novofumigatus IBT 16806, Aspergillus novofumigatus IBT 16806
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