STRINGSTRING
dnaX dnaX KIR01187.1 KIR01187.1 KIR01206.1 KIR01206.1 xpt xpt KIR01233.1 KIR01233.1 guaA guaA KIR01264.1 KIR01264.1 KIR01284.1 KIR01284.1 KIR01341.1 KIR01341.1 KIR01342.1 KIR01342.1 KIR01343.1 KIR01343.1 KIR01357.1 KIR01357.1 KIR01358.1 KIR01358.1 bioB bioB KIR01374.1 KIR01374.1 polC polC KIR01386.1 KIR01386.1 KIR01396.1 KIR01396.1 KIR01397.1 KIR01397.1 KIR01401.1 KIR01401.1 KIR01405.1 KIR01405.1 nadD nadD KIR01415.1 KIR01415.1 KIR01465.1 KIR01465.1 pyrD pyrD pyrK pyrK KIR01471.1 KIR01471.1 KIR01478.1 KIR01478.1 KIR01479.1 KIR01479.1 KIR01512.1 KIR01512.1 KIR01513.1 KIR01513.1 nusA nusA KIR01556.1 KIR01556.1 KIR01569.1 KIR01569.1 KIR01574.1 KIR01574.1 cobQ cobQ cobD cobD KIR01579.1 KIR01579.1 cobS cobS KIR01582.1 KIR01582.1 KIR01583.1 KIR01583.1 KIR01584.1 KIR01584.1 cbiA cbiA KIR01586.1 KIR01586.1 KIR01587.1 KIR01587.1 KIR01588.1 KIR01588.1 KIR01589.1 KIR01589.1 cbiD cbiD tgt tgt KIR01607.1 KIR01607.1 ribH ribH ribA ribA KIR01610.1 KIR01610.1 KIR01611.1 KIR01611.1 KIR01612.1 KIR01612.1 KIR01613.1 KIR01613.1 KIR01617.1 KIR01617.1 KIR01619.1 KIR01619.1 KIR01643.1 KIR01643.1 KIR01644.1 KIR01644.1 purD purD purN purN purM purM purE purE pyrE pyrE nadK nadK dxs dxs nusB nusB KIR01681.1 KIR01681.1 KIR01682.1 KIR01682.1 KIR01688.1 KIR01688.1 KIR01689.1 KIR01689.1 KIR01694.1 KIR01694.1 KIR01715.1 KIR01715.1 KIR01727.1 KIR01727.1 KIR01737.1 KIR01737.1 KIR01768.1 KIR01768.1 KIR01769.1 KIR01769.1 cmk cmk pyrF pyrF KIR01797.1 KIR01797.1 KIR01798.1 KIR01798.1 hemC hemC KIR01801.1 KIR01801.1 KIR01803.1 KIR01803.1 KIR01807.1 KIR01807.1 KIR01817.1 KIR01817.1 KIR01874.1 KIR01874.1 KIR01876.1 KIR01876.1 KIR01911.1 KIR01911.1 KIR01944.1 KIR01944.1 KIR01946.1 KIR01946.1 KIR01948.1 KIR01948.1 KIR01951.1 KIR01951.1 KIR01961.1 KIR01961.1 sigA sigA dnaG dnaG rpoC rpoC rpoB rpoB KIR01988.1 KIR01988.1 KIR02005.1 KIR02005.1 KIR02019.1 KIR02019.1 KIR02020.1 KIR02020.1 KIR02021.1 KIR02021.1 moaC moaC KIR02023.1 KIR02023.1 KIR02026.1 KIR02026.1 mobA mobA KIR02028.1 KIR02028.1 pyrB pyrB KIR02036.1 KIR02036.1 KIR02059.1 KIR02059.1 KIR02060.1 KIR02060.1 KIR02069.1 KIR02069.1 KIR02070.1 KIR02070.1 murA murA KIR02181.1 KIR02181.1 KIR02182.1 KIR02182.1 KIR02231.1 KIR02231.1 apt apt KIR02246.1 KIR02246.1 KIR02247.1 KIR02247.1 cbiM cbiM selA selA KIR02291.1 KIR02291.1 KIR02298.1 KIR02298.1 KIR02346.1 KIR02346.1 KIR02357.1 KIR02357.1 KIR02370.1 KIR02370.1 KIR02377.1 KIR02377.1 KIR02387.1 KIR02387.1 KIR02393.1 KIR02393.1 KIR02398.1 KIR02398.1 KIR02407.1 KIR02407.1 KIR02423.1 KIR02423.1 KIR02443.1 KIR02443.1 KIR02476.1 KIR02476.1 KIR02477.1 KIR02477.1 KIR02481.1 KIR02481.1 proC proC KIR02510.1 KIR02510.1 KIR02596.1 KIR02596.1 KIR02615.1 KIR02615.1 KIR02622.1 KIR02622.1 KIR02625.1 KIR02625.1 KIR02637.1 KIR02637.1 KIR02638.1 KIR02638.1 KIR02639.1 KIR02639.1 KIR02640.1 KIR02640.1 adk adk rpoA rpoA murA-2 murA-2 KIR02699.1 KIR02699.1 atpA atpA KIR02702.1 KIR02702.1 KIR02703.1 KIR02703.1 thiM thiM thiE thiE KIR02717.1 KIR02717.1 KIR02718.1 KIR02718.1 KIR02727.1 KIR02727.1 KIR02728.1 KIR02728.1 nusG nusG guaB guaB hemA hemA KIR02788.1 KIR02788.1 KIR02789.1 KIR02789.1 hemL hemL KIR02793.1 KIR02793.1 coaD coaD KIR02896.1 KIR02896.1 KIR02898.1 KIR02898.1 KIR02910.1 KIR02910.1 upp upp KIR02925.1 KIR02925.1 dacA dacA KIR02942.1 KIR02942.1 rho rho trpE trpE trpD trpD KIR03026.1 KIR03026.1 KIR03027.1 KIR03027.1 KIR03028.1 KIR03028.1 trpB trpB trpA trpA KIR03034.1 KIR03034.1 KIR03052.1 KIR03052.1 KIR03065.1 KIR03065.1 queE queE queC queC queF queF KIR03077.1 KIR03077.1 thiI thiI KIR03134.1 KIR03134.1 KIR03151.1 KIR03151.1 KIR03165.1 KIR03165.1 coaX coaX KIR03227.1 KIR03227.1 KIR03231.1 KIR03231.1 KIR03242.1 KIR03242.1 pyrC pyrC KIR03266.1 KIR03266.1 KIR03268.1 KIR03268.1 KIR03269.1 KIR03269.1 folE folE folD folD KIR03303.1 KIR03303.1 KIR03311.1 KIR03311.1 purC purC KIR03332.1 KIR03332.1 purA purA KIR03336.1 KIR03336.1 KIR03339.1 KIR03339.1 KIR03340.1 KIR03340.1 priA priA KIR03428.1 KIR03428.1 KIR03446.1 KIR03446.1 KIR03447.1 KIR03447.1 KIR03511.1 KIR03511.1 carA carA carB carB pyrG pyrG purF purF KIR03557.1 KIR03557.1 KIR03567.1 KIR03567.1 KIR03676.1 KIR03676.1 KIR03739.1 KIR03739.1 KIR03748.1 KIR03748.1 KIR03749.1 KIR03749.1 KIR03752.1 KIR03752.1 KIR03754.1 KIR03754.1 KIR03763.1 KIR03763.1 KIR03781.1 KIR03781.1 KIR03786.1 KIR03786.1 KIR03833.1 KIR03833.1 KIR03834.1 KIR03834.1 KIR03858.1 KIR03858.1 KIR03862.1 KIR03862.1 proA proA KIR03896.1 KIR03896.1 polA polA coaE coaE KIR03909.1 KIR03909.1 KIR03921.1 KIR03921.1 KIR03927.1 KIR03927.1 KIR03933.1 KIR03933.1 KIR03947.1 KIR03947.1 KIR04010.1 KIR04010.1 KIR04036.1 KIR04036.1 sigA-2 sigA-2 KIR01169.1 KIR01169.1 KIR01170.1 KIR01170.1 ackA ackA KIR01143.1 KIR01143.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
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dnaXDNA polymerase III subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (523 aa)
KIR01187.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)
KIR01206.1Dihydrofolate synthase / Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. (436 aa)
xptXanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. (193 aa)
KIR01233.1Hypothetical protein. (306 aa)
guaAGMP synthase; Catalyzes the synthesis of GMP from XMP. (522 aa)
KIR01264.1Hypothetical protein; FIG00527456:. (467 aa)
KIR01284.1Hypothetical protein. (130 aa)
KIR01341.1Ribosomal-protein-alanine acetyltransferase. (143 aa)
KIR01342.1Hypothetical protein. (204 aa)
KIR01343.1Tryptophan synthase beta chain. (387 aa)
KIR01357.1Thiazole biosynthesis protein ThiH. (471 aa)
KIR01358.1Biotin synthase. (343 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (321 aa)
KIR01374.1Putative peptidoglycan bound protein (LPXTG motif). (901 aa)
polCDNA polymerase III alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1472 aa)
KIR01386.1Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (217 aa)
KIR01396.1S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (273 aa)
KIR01397.1S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (55 aa)
KIR01401.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
KIR01405.1Hydrolase (HAD superfamily), YqeK. (159 aa)
nadDHypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (204 aa)
KIR01415.1GTP pyrophosphokinase. (199 aa)
KIR01465.1Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family. (359 aa)
pyrDDihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. (302 aa)
pyrKDihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (255 aa)
KIR01471.1Putative coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (361 aa)
KIR01478.1Hypothetical protein. (324 aa)
KIR01479.1Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (484 aa)
KIR01512.1Riboflavin kinase / FMN adenylyltransferase. (226 aa)
KIR01513.1Riboflavin kinase / FMN adenylyltransferase. (84 aa)
nusATranscription termination protein NusA; Participates in both transcription termination and antitermination. (480 aa)
KIR01556.1Hypothetical protein. (696 aa)
KIR01569.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (278 aa)
KIR01574.1Cobalt-precorrin-8x methylmutase. (216 aa)
cobQCobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (506 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (322 aa)
KIR01579.1Hypothetical protein. (52 aa)
cobSCobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (255 aa)
KIR01582.1Adenosylcobinamide-phosphate guanylyltransferase. (198 aa)
KIR01583.1Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase. (130 aa)
KIR01584.1Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase. (215 aa)
cbiACobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (454 aa)
KIR01586.1Cobalt-precorrin-6y C15-methyltransferase. (606 aa)
KIR01587.1Cobalt-precorrin-3b C17-methyltransferase. (244 aa)
KIR01588.1Cobalt-precorrin-4 C11-methyltransferase. (252 aa)
KIR01589.1Cobalt-precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (231 aa)
cbiDCobalt-precorrin-6 synthase, anaerobic; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (361 aa)
tgttRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] (380 aa)
KIR01607.1Phosphoribosylformylglycinamidine synthaseansferase subunit. (1250 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (154 aa)
ribA3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (201 aa)
KIR01610.1Riboflavin synthase alpha chain. (98 aa)
KIR01611.1Riboflavin synthase alpha chain. (115 aa)
KIR01612.1TWA4_scaffold00001, whole genome shotgun sequence; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase. (63 aa)
KIR01613.1TWA4_scaffold00001, whole genome shotgun sequence; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase. (235 aa)
KIR01617.1Hypothetical protein. (456 aa)
KIR01619.1Hypothetical protein. (324 aa)
KIR01643.1Hypothetical protein. (84 aa)
KIR01644.1Pantothenate kinase type II, eukaryotic. (163 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (427 aa)
purNPhosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (197 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (342 aa)
purEPhosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (172 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (224 aa)
nadKNAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (291 aa)
dxs1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (634 aa)
nusBTranscription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (136 aa)
KIR01681.1DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (88 aa)
KIR01682.1Guanylate kinase. (182 aa)
KIR01688.1DNA primase. (194 aa)
KIR01689.1Hypothetical protein. (454 aa)
KIR01694.1RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family. (326 aa)
KIR01715.1Putative hydrolase. (378 aa)
KIR01727.1Hydrolase (HAD superfamily). (258 aa)
KIR01737.1Hypothetical protein; FIG01031838:. (131 aa)
KIR01768.1Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. (257 aa)
KIR01769.1Cytidylate kinase. (216 aa)
cmkCytidylate kinase. (223 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (310 aa)
KIR01797.1Porphobilinogen synthase; Belongs to the ALAD family. (327 aa)
KIR01798.1Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase. (506 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (300 aa)
KIR01801.1Hypothetical protein. (151 aa)
KIR01803.1Hydrolase (HAD superfamily) in cluster with DUF1447. (269 aa)
KIR01807.1RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (162 aa)
KIR01817.1Hypothetical protein. (456 aa)
KIR01874.15-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (182 aa)
KIR01876.1Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (228 aa)
KIR01911.1Glucosamine-1-phosphate N-acetyltransferase. (224 aa)
KIR01944.1Putative radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent. (456 aa)
KIR01946.1GTP pyrophosphokinase, (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (742 aa)
KIR01948.1DNA polymerase III alpha subunit. (630 aa)
KIR01951.1DNA polymerase III alpha subunit. (567 aa)
KIR01961.1Uridine kinase. (536 aa)
sigARNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (303 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (578 aa)
rpoCDNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1221 aa)
rpoBDNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1265 aa)
KIR01988.1Hypothetical protein. (143 aa)
KIR02005.1RNA polymerase sporulation specific sigma factor SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (214 aa)
KIR02019.1Formate dehydrogenase accessory protein FdhD; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. (202 aa)
KIR02020.1Molybdopterin-guanine dinucleotide biosynthesis protein MobB. (163 aa)
KIR02021.1Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (336 aa)
moaCMolybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (161 aa)
KIR02023.1Hypothetical ATP-binding protein, containing DUF265 domain protein. (379 aa)
KIR02026.1Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (339 aa)
mobAMolybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. (197 aa)
KIR02028.1Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (410 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (307 aa)
KIR02036.1Aspartate carbamoyltransferase regulatory chain (PyrI). (84 aa)
KIR02059.1RNA polymerase sporulation specific sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (258 aa)
KIR02060.1RNA polymerase sporulation specific sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (237 aa)
KIR02069.1dTDP-4-dehydrorhamnose 3,5-epimerase. (113 aa)
KIR02070.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (313 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (417 aa)
KIR02181.1Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (409 aa)
KIR02182.1Molybdenum cofactor biosynthesis protein C. (146 aa)
KIR02231.1Cytidylate kinase. (208 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (174 aa)
KIR02246.1Hypothetical protein. (520 aa)
KIR02247.1Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (335 aa)
cbiMSubstrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (371 aa)
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (442 aa)
KIR02291.1Seryl-tRNA synthetase. (405 aa)
KIR02298.1Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. (1074 aa)
KIR02346.1Ribonucleotide reductase of class III (anaerobic), activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (160 aa)
KIR02357.1DNA polymerase III delta prime subunit. (326 aa)
KIR02370.1Metal-dependent hydrolases of the beta-lactamase superfamily I. (277 aa)
KIR02377.1Seryl-tRNA synthetase. (426 aa)
KIR02387.1Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (178 aa)
KIR02393.1Dihydrofolate synthase / Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. (429 aa)
KIR02398.1RNA polymerase sporulation specific sigma factor SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (238 aa)
KIR02407.1Hydrolase (HAD superfamily) in cluster with DUF1447. (270 aa)
KIR02423.1UDP-glucose dehydrogenase. (419 aa)
KIR02443.1Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (177 aa)
KIR02476.1ATP binding protein. (227 aa)
KIR02477.1ATPase. (161 aa)
KIR02481.1RNA polymerase sigma-70 factor, ECF subfamily. (161 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (264 aa)
KIR02510.1DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (365 aa)
KIR02596.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KIR02615.1Replication protein. (358 aa)
KIR02622.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KIR02625.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KIR02637.1Methylcobalamin methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. (291 aa)
KIR02638.1Methylcobalamin:coenzyme M methyltransferase, methanol-specific; Belongs to the uroporphyrinogen decarboxylase family. (357 aa)
KIR02639.1Methylcobalamin methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. (348 aa)
KIR02640.1Methylcobalamin:coenzyme M methyltransferase, methanol-specific; Belongs to the uroporphyrinogen decarboxylase family. (357 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (214 aa)
rpoADNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (321 aa)
murA-2UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (430 aa)
KIR02699.1V-type ATP synthase subunit E. (204 aa)
atpAV-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (590 aa)
KIR02702.1V-type ATP synthase subunit B. (431 aa)
KIR02703.1V-type ATP synthase subunit D. (216 aa)
thiMHydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (273 aa)
thiEThiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (213 aa)
KIR02717.1Phosphomethylpyrimidine kinase. (268 aa)
KIR02718.1Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. (223 aa)
KIR02727.1Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (156 aa)
KIR02728.1Hypothetical protein. (217 aa)
nusGTranscription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (208 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (484 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (404 aa)
KIR02788.1Hypothetical protein. (57 aa)
KIR02789.1Hypothetical protein. (83 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (425 aa)
KIR02793.1Lipoate-protein ligase A. (310 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (160 aa)
KIR02896.1Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (249 aa)
KIR02898.1Quinolinate phosphoribosyltransferase; Belongs to the NadC/ModD family. (284 aa)
KIR02910.1Pyridoxal kinase; Belongs to the pyridoxine kinase family. (279 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (210 aa)
KIR02925.1Nicotinamide mononucleotide adenylyltransferase. (182 aa)
dacAHypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (310 aa)
KIR02942.1Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (440 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (447 aa)
trpEAnthranilate synthase, aminase component; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high c [...] (487 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (348 aa)
KIR03026.1Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. (232 aa)
KIR03027.1Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. (91 aa)
KIR03028.1Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. (98 aa)
trpBTryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (397 aa)
trpATryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (260 aa)
KIR03034.1Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family. (276 aa)
KIR03052.1Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. (170 aa)
KIR03065.1Queuosine biosynthesis QueD, PTPS-I. (139 aa)
queEQueuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (214 aa)
queCQueuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). (226 aa)
queFNADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (160 aa)
KIR03077.1TWA4_scaffold00001, whole genome shotgun sequence; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain. (464 aa)
thiIThiamine biosynthesis protein thiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (396 aa)
KIR03134.1Circadian phase modifier. (249 aa)
KIR03151.1Hypothetical protein. (220 aa)
KIR03165.1NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (254 aa)
coaXPantothenate kinase type III, CoaX-like protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (255 aa)
KIR03227.1Anaerobic sulfite reductase subunit B. (264 aa)
KIR03231.1RNA polymerase sigma-70 factor, ECF subfamily. (161 aa)
KIR03242.1Hydrolase (HAD superfamily) in cluster with DUF1447. (254 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (419 aa)
KIR03266.1Para-aminobenzoate synthase, aminase component. (450 aa)
KIR03268.12-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (280 aa)
KIR03269.1Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (268 aa)
folEGTP cyclohydrolase I type 1. (182 aa)
folDMethylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (325 aa)
KIR03303.1Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase. (145 aa)
KIR03311.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (490 aa)
purCPhosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. (184 aa)
KIR03332.1Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (477 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (425 aa)
KIR03336.1RNA polymerase sigma factor RpoD. (250 aa)
KIR03339.1NimC/NimA family protein. (135 aa)
KIR03340.1NimC/NimA family protein. (137 aa)
priAHelicase PriA essential for oriC/DnaA-independent DNA replication; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (739 aa)
KIR03428.1Thiamin pyrophosphokinase. (145 aa)
KIR03446.1Phage DNA polymerase. (594 aa)
KIR03447.1Phage / plasmid primase, P4 family. (614 aa)
KIR03511.1Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S; Belongs to the CinA family. (166 aa)
carACarbamoyl-phosphate synthase small chain; Belongs to the CarA family. (375 aa)
carBCarbamoyl-phosphate synthase large chain. (1058 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (537 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (480 aa)
KIR03557.1RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KIR03567.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)
KIR03676.1Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein. (162 aa)
KIR03739.1Epoxyqueuosine (oQ) reductase QueG. (268 aa)
KIR03748.1Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (418 aa)
KIR03749.1Hypothetical protein. (166 aa)
KIR03752.1Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein. (131 aa)
KIR03754.1Hypothetical protein. (130 aa)
KIR03763.1RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
KIR03781.1Hypothetical protein. (181 aa)
KIR03786.1Phage encoded DNA polymerase I; FIG006036:. (664 aa)
KIR03833.1Cof-like hydrolase. (65 aa)
KIR03834.1Hypothetical protein. (212 aa)
KIR03858.1Hypothetical protein. (150 aa)
KIR03862.1RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (161 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (426 aa)
KIR03896.1Hypothetical protein. (327 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. (872 aa)
coaEDephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (202 aa)
KIR03909.1ACT domain protein; Belongs to the UPF0237 family. (90 aa)
KIR03921.1Hypothetical protein. (132 aa)
KIR03927.1Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. (396 aa)
KIR03933.1IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase. (391 aa)
KIR03947.1Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein. (365 aa)
KIR04010.1Hypothetical protein. (198 aa)
KIR04036.1Hypothetical protein. (86 aa)
sigA-2RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (382 aa)
KIR01169.1RNA polymerase sigma factor RpoD. (88 aa)
KIR01170.1Protein of unknown function DUF208. (91 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (395 aa)
KIR01143.1Thymidylate synthase. (251 aa)
Your Current Organism:
Lachnospiraceae bacterium TWA4
NCBI taxonomy Id: 1392836
Other names: L. bacterium TWA4
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