STRINGSTRING
ERL46007.1 ERL46007.1 ERL46031.1 ERL46031.1 ERL47140.1 ERL47140.1 ERL47385.1 ERL47385.1 trmFO-2 trmFO-2 ERL47483.1 ERL47483.1 ERL47487.1 ERL47487.1 dhs dhs rlmE-2 rlmE-2 ERL47625.1 ERL47625.1 ligA ligA ftsZ1 ftsZ1 ERL47685.1 ERL47685.1 ERL47687.1 ERL47687.1 cysI cysI ERL47709.1 ERL47709.1 rsmH-2 rsmH-2 ERL47741.1 ERL47741.1 ERL47074.1 ERL47074.1 ERL46040.1 ERL46040.1 ERL46259.1 ERL46259.1 ERL46284.1 ERL46284.1 ERL46294.1 ERL46294.1 ERL46305.1 ERL46305.1 arsC arsC sucB sucB leuC leuC ERL46395.1 ERL46395.1 rlmH-2 rlmH-2 trmD-2 trmD-2 ERL46484.1 ERL46484.1 rlmN rlmN ftsK ftsK rsmG-2 rsmG-2 ERL46655.1 ERL46655.1 rsmI-2 rsmI-2 kdsB kdsB phoR phoR ERL46787.1 ERL46787.1 surA surA prmC-2 prmC-2 ubiG-2 ubiG-2 ERL45934.1 ERL45934.1 ERL45992.1 ERL45992.1 ERL45993.1 ERL45993.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERL46007.1Hypothetical protein. (302 aa)
ERL46031.1Hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (298 aa)
ERL47140.1Glycine betaine transporter protein. (196 aa)
ERL47385.1Putative lipoprotein. (389 aa)
trmFO-2Hypothetical protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (471 aa)
ERL47483.1Hypothetical protein. (221 aa)
ERL47487.1ABC transporter nucleotide binding-ATPase protein. (410 aa)
dhs2-dehydro-3-deoxyphosphoheptonate aldolase protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (283 aa)
rlmE-2Domain containing protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (228 aa)
ERL47625.1Hypothetical protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1237 aa)
ligADNA ligase protein. (372 aa)
ftsZ1Cell division protein FtsZ; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. (265 aa)
ERL47685.11-deoxy-D-xylulose-5-phosphate reductoisomerase protein. (236 aa)
ERL47687.1Isoquinoline 1-oxidoreductase protein; Overlaps another CDS with the same product name. (210 aa)
cysISulfite reductase hemoprotein beta-component; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (264 aa)
ERL47709.1Hypothetical protein. (282 aa)
rsmH-2Hypothetical protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (348 aa)
ERL47741.1NAD transhydrogenase subunit alpha protein; Belongs to the precorrin methyltransferase family. (290 aa)
ERL47074.1DNA polymerase III subunit epsilon protein. (330 aa)
ERL46040.1acyl-CoA dehydrogenase protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (266 aa)
ERL46259.1Phosphoribosylamine--glycine ligase protein. (308 aa)
ERL46284.1Peptidase M16 domain-containing protein; Overlaps CDS with the same product name. (259 aa)
ERL46294.1Hypothetical protein; Belongs to the GcvT family. (271 aa)
ERL46305.1Type II secretion protein. (260 aa)
arsCArsC protein; Belongs to the N(4)/N(6)-methyltransferase family. (376 aa)
sucB2-oxoglutarate dehydrogenase E2 component protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (255 aa)
leuC3-isopropylmalate dehydratase large subunit protein. (184 aa)
ERL46395.1Thioesterase superfamily protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (214 aa)
rlmH-23or 17beta-hydroxysteroid dehydrogenase protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (158 aa)
trmD-2Pyruvate dehydrogenase E1 component subunit alpha protein; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (232 aa)
ERL46484.1Hypothetical protein. (169 aa)
rlmNenoyl-CoA hydratase protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (381 aa)
ftsKDNA translocase FtsK protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (459 aa)
rsmG-2ABC transporter ATP-binding protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (226 aa)
ERL46655.1Hypothetical protein. (179 aa)
rsmI-2Glutathione S-transferase protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (295 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (212 aa)
phoRPutative two-component sensor histidine kinase protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (256 aa)
ERL46787.13-oxoacyl-acyl-carrier protein reductase. (150 aa)
surAPpiC-type peptidyl-prolyl cis-trans isomerase protein. (219 aa)
prmC-2Hypothetical protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (306 aa)
ubiG-2Hypothetical protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (246 aa)
ERL45934.1Hypothetical protein. (290 aa)
ERL45992.1Hypothetical protein. (215 aa)
ERL45993.1Hypothetical protein. (244 aa)
Your Current Organism:
Micropelagos thuwalensis
NCBI taxonomy Id: 1397666
Other names: C. Micropelagos thuwalensis, Candidatus Micropelagos thuwalensis, alpha proteobacterium RS24
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