STRINGSTRING
dnaD dnaD GCA_000702585_03170 GCA_000702585_03170 GCA_000702585_03169 GCA_000702585_03169 GCA_000702585_03161 GCA_000702585_03161 GCA_000702585_03156 GCA_000702585_03156 GCA_000702585_03150 GCA_000702585_03150 czcD_3 czcD_3 czcD_2 czcD_2 GCA_000702585_03107 GCA_000702585_03107 GCA_000702585_03095 GCA_000702585_03095 hemY_3 hemY_3 GCA_000702585_03031 GCA_000702585_03031 lysA lysA yrdA yrdA GCA_000702585_02990 GCA_000702585_02990 GCA_000702585_02979 GCA_000702585_02979 fhs1 fhs1 udk_2 udk_2 cshB_2 cshB_2 cshA_2 cshA_2 dhbC dhbC GCA_000702585_02878 GCA_000702585_02878 puuR puuR GCA_000702585_02865 GCA_000702585_02865 GCA_000702585_02855 GCA_000702585_02855 ogt ogt hemH hemH hemY_1 hemY_1 crtN_3 crtN_3 crtN_2 crtN_2 crtM crtM crtP_1 crtP_1 GCA_000702585_02741 GCA_000702585_02741 GCA_000702585_02740 GCA_000702585_02740 GCA_000702585_02739 GCA_000702585_02739 yqeH yqeH nadD nadD GCA_000702585_02698 GCA_000702585_02698 GCA_000702585_02689 GCA_000702585_02689 czcD_1 czcD_1 GCA_000702585_02684 GCA_000702585_02684 polX polX etfA etfA trxA_4 trxA_4 hemA hemA selO selO GCA_000702585_02593 GCA_000702585_02593 rplU rplU rpmA rpmA nifS nifS nadC nadC dtd dtd moeB_1 moeB_1 rarA rarA iscS iscS yrrK yrrK udk_1 udk_1 fabF fabF GCA_000702585_02475 GCA_000702585_02475 pdhA pdhA pdhB pdhB typA typA ctaA ctaA GCA_000702585_02405 GCA_000702585_02405 priA priA rpmB rpmB smc smc rpsP rpsP rplS rplS rbgA rbgA topA topA rpsB rpsB GCA_000702585_02294 GCA_000702585_02294 ribF ribF rpsO rpsO recQ recQ ypfD ypfD hup hup GCA_000702585_02247 GCA_000702585_02247 nth nth cshA_1 cshA_1 GCA_000702585_02196 GCA_000702585_02196 crtN_1 crtN_1 GCA_000702585_02174 GCA_000702585_02174 rplY rplY GCA_000702585_02166 GCA_000702585_02166 yxeP_1 yxeP_1 rnhA rnhA GCA_000702585_02137 GCA_000702585_02137 gltB_2 gltB_2 GCA_000702585_02104 GCA_000702585_02104 GCA_000702585_02103 GCA_000702585_02103 GCA_000702585_02097 GCA_000702585_02097 fieF fieF ydjH ydjH sacX sacX bglF_3 bglF_3 parE_1 parE_1 gldA_1 gldA_1 GCA_000702585_01908 GCA_000702585_01908 sbcD sbcD cutC cutC dipZ dipZ GCA_000702585_01848 GCA_000702585_01848 yvqK yvqK GCA_000702585_01804 GCA_000702585_01804 topB topB GCA_000702585_01791 GCA_000702585_01791 rnz rnz GCA_000702585_01776 GCA_000702585_01776 bfmBAB bfmBAB bfmBAA bfmBAA recN recN GCA_000702585_01754 GCA_000702585_01754 gluP_1 gluP_1 GCA_000702585_01717 GCA_000702585_01717 rpmG2 rpmG2 nfo nfo cshB_1 cshB_1 dnaG dnaG recO recO dgkA dgkA ybeY ybeY serC serC rpsT rpsT GCA_000702585_01645 GCA_000702585_01645 rplT rplT rpmI rpmI dnaI dnaI dnaB dnaB nrnA nrnA ackA ackA ezrA ezrA rpsD rpsD acs acs GCA_000702585_01576 GCA_000702585_01576 trxA_2 trxA_2 yugI_2 yugI_2 ptsG_4 ptsG_4 ptsG_2 ptsG_2 GCA_000702585_01479 GCA_000702585_01479 GCA_000702585_01476 GCA_000702585_01476 yurY yurY GCA_000702585_01470 GCA_000702585_01470 GCA_000702585_01463 GCA_000702585_01463 GCA_000702585_01461 GCA_000702585_01461 GCA_000702585_01444 GCA_000702585_01444 yvyD yvyD GCA_000702585_01386 GCA_000702585_01386 treB treB dus_2 dus_2 bcp bcp ribBA ribBA nos nos arsA arsA GCA_000702585_01223 GCA_000702585_01223 GCA_000702585_01184 GCA_000702585_01184 GCA_000702585_01156 GCA_000702585_01156 GCA_000702585_01155 GCA_000702585_01155 bglF_2 bglF_2 GCA_000702585_01119 GCA_000702585_01119 dapH_1 dapH_1 GCA_000702585_01087 GCA_000702585_01087 gltB_1 gltB_1 ptsG_1 ptsG_1 rpmE2 rpmE2 spo0F spo0F rffG rffG speB speB GCA_000702585_00916 GCA_000702585_00916 GCA_000702585_00908 GCA_000702585_00908 GCA_000702585_00884 GCA_000702585_00884 mtnW mtnW mtnX mtnX mtnB mtnB ubiB ubiB mgtE mgtE GCA_000702585_00822 GCA_000702585_00822 kynU kynU GCA_000702585_00772 GCA_000702585_00772 GCA_000702585_00763 GCA_000702585_00763 aes_1 aes_1 yhhW yhhW yocK yocK GCA_000702585_00734 GCA_000702585_00734 rocF rocF rpsI rpsI rplM rplM truA truA rplQ rplQ rpsK rpsK rpsM rpsM rpmJ rpmJ rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN2 rpsN2 rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ GCA_000702585_00652 GCA_000702585_00652 rpsG rpsG rpsL rpsL rplL rplL rplJ rplJ rplA rplA rplK rplK mrnC mrnC mcsB mcsB dus_1 dus_1 sulD sulD yugI_1 yugI_1 ispE ispE rnmV rnmV recR recR GCA_000702585_00555 GCA_000702585_00555 tadA tadA dgk dgk dck dck pdxS pdxS guaB_1 guaB_1 gyrB gyrB recF recF rpmH rpmH parB parB engD engD rpsF rpsF rpsR rpsR dnaC dnaC GCA_000702585_00502 GCA_000702585_00502 GCA_000702585_00497 GCA_000702585_00497 dbpA dbpA lip2_2 lip2_2 alkA alkA GCA_000702585_00423 GCA_000702585_00423 GCA_000702585_00396 GCA_000702585_00396 yflT_3 yflT_3 yflT_2 yflT_2 gldA_2 gldA_2 yxeP_2 yxeP_2 ptsG_6 ptsG_6 bglF_4 bglF_4 GCA_000702585_00269 GCA_000702585_00269 ptsG_5 ptsG_5 yqjY yqjY queD queD lip2_1 lip2_1 lgrD_2 lgrD_2 GCA_000702585_00223 GCA_000702585_00223 GCA_000702585_00220 GCA_000702585_00220 aes_2 aes_2 argC argC argB argB gluP_2 gluP_2 udk_3 udk_3 GCA_000702585_00124 GCA_000702585_00124 puo puo crtP_2 crtP_2 GCA_000702585_00041 GCA_000702585_00041 purF purF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaDUnannotated protein. (195 aa)
GCA_000702585_03170Unannotated protein. (1328 aa)
GCA_000702585_03169Unannotated protein. (693 aa)
GCA_000702585_03161Unannotated protein. (110 aa)
GCA_000702585_03156Unannotated protein. (161 aa)
GCA_000702585_03150Unannotated protein; Belongs to the UPF0758 family. (151 aa)
czcD_3Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (313 aa)
czcD_2Unannotated protein. (283 aa)
GCA_000702585_03107Unannotated protein. (92 aa)
GCA_000702585_03095Unannotated protein; Belongs to the UPF0758 family. (151 aa)
hemY_3Unannotated protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (454 aa)
GCA_000702585_03031Unannotated protein. (142 aa)
lysAUnannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (430 aa)
yrdAUnannotated protein. (178 aa)
GCA_000702585_02990Unannotated protein. (363 aa)
GCA_000702585_02979Unannotated protein. (184 aa)
fhs1Unannotated protein; Belongs to the formate--tetrahydrofolate ligase family. (561 aa)
udk_2Unannotated protein. (201 aa)
cshB_2Unannotated protein. (388 aa)
cshA_2Unannotated protein; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. (502 aa)
dhbCUnannotated protein. (461 aa)
GCA_000702585_02878Unannotated protein. (302 aa)
puuRUnannotated protein. (179 aa)
GCA_000702585_02865Unannotated protein. (243 aa)
GCA_000702585_02855Unannotated protein. (137 aa)
ogtUnannotated protein. (146 aa)
hemHUnannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (309 aa)
hemY_1Unannotated protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (461 aa)
crtN_3Unannotated protein. (497 aa)
crtN_2Unannotated protein. (492 aa)
crtMUnannotated protein. (279 aa)
crtP_1Unannotated protein. (488 aa)
GCA_000702585_02741Unannotated protein. (321 aa)
GCA_000702585_02740Unannotated protein. (269 aa)
GCA_000702585_02739Unannotated protein. (135 aa)
yqeHUnannotated protein. (376 aa)
nadDUnannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (189 aa)
GCA_000702585_02698Unannotated protein. (364 aa)
GCA_000702585_02689Unannotated protein. (303 aa)
czcD_1Unannotated protein. (301 aa)
GCA_000702585_02684Unannotated protein. (285 aa)
polXUnannotated protein. (569 aa)
etfAUnannotated protein. (321 aa)
trxA_4Unannotated protein; Belongs to the thioredoxin family. (104 aa)
hemAUnannotated protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (449 aa)
selOUnannotated protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (479 aa)
GCA_000702585_02593Unannotated protein; Belongs to the UPF0758 family. (209 aa)
rplUUnannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa)
rpmAUnannotated protein; Belongs to the bacterial ribosomal protein bL27 family. (93 aa)
nifSUnannotated protein. (376 aa)
nadCUnannotated protein; Belongs to the NadC/ModD family. (293 aa)
dtdUnannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (147 aa)
moeB_1Unannotated protein. (255 aa)
rarAUnannotated protein. (435 aa)
iscSUnannotated protein. (379 aa)
yrrKUnannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (140 aa)
udk_1Unannotated protein. (212 aa)
fabFUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (410 aa)
GCA_000702585_02475Unannotated protein; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. (373 aa)
pdhAUnannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (361 aa)
pdhBUnannotated protein. (325 aa)
typAUnannotated protein. (614 aa)
ctaAUnannotated protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. (299 aa)
GCA_000702585_02405Unannotated protein. (256 aa)
priAUnannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (774 aa)
rpmBUnannotated protein; Belongs to the bacterial ribosomal protein bL28 family. (62 aa)
smcUnannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1185 aa)
rpsPUnannotated protein; Belongs to the bacterial ribosomal protein bS16 family. (91 aa)
rplSUnannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (117 aa)
rbgAUnannotated protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (286 aa)
topAUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (698 aa)
rpsBUnannotated protein; Belongs to the universal ribosomal protein uS2 family. (246 aa)
GCA_000702585_02294Unannotated protein. (98 aa)
ribFUnannotated protein; Belongs to the ribF family. (308 aa)
rpsOUnannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
recQUnannotated protein. (472 aa)
ypfDUnannotated protein. (381 aa)
hupUnannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
GCA_000702585_02247Unannotated protein. (423 aa)
nthUnannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (221 aa)
cshA_1Unannotated protein. (749 aa)
GCA_000702585_02196Unannotated protein. (191 aa)
crtN_1Unannotated protein. (487 aa)
GCA_000702585_02174Unannotated protein. (141 aa)
rplYUnannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (222 aa)
GCA_000702585_02166Unannotated protein. (272 aa)
yxeP_1Unannotated protein. (365 aa)
rnhAUnannotated protein. (129 aa)
GCA_000702585_02137Unannotated protein. (306 aa)
gltB_2Unannotated protein. (1478 aa)
GCA_000702585_02104Unannotated protein. (99 aa)
GCA_000702585_02103Unannotated protein. (75 aa)
GCA_000702585_02097Unannotated protein. (162 aa)
fieFUnannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (287 aa)
ydjHUnannotated protein; Belongs to the carbohydrate kinase PfkB family. (314 aa)
sacXUnannotated protein. (476 aa)
bglF_3Unannotated protein. (629 aa)
parE_1Unannotated protein. (655 aa)
gldA_1Unannotated protein. (338 aa)
GCA_000702585_01908Unannotated protein. (139 aa)
sbcDUnannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (368 aa)
cutCUnannotated protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (220 aa)
dipZUnannotated protein. (232 aa)
GCA_000702585_01848Unannotated protein. (363 aa)
yvqKUnannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family. (183 aa)
GCA_000702585_01804Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
topBUnannotated protein. (708 aa)
GCA_000702585_01791Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)
rnzUnannotated protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (301 aa)
GCA_000702585_01776Unannotated protein; Belongs to the UPF0173 family. (224 aa)
bfmBABUnannotated protein. (325 aa)
bfmBAAUnannotated protein. (335 aa)
recNUnannotated protein; May be involved in recombinational repair of damaged DNA. (565 aa)
GCA_000702585_01754Unannotated protein; Belongs to the FPP/GGPP synthase family. (292 aa)
gluP_1Unannotated protein. (349 aa)
GCA_000702585_01717Unannotated protein. (256 aa)
rpmG2Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)
nfoUnannotated protein; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (300 aa)
cshB_1Unannotated protein. (447 aa)
dnaGUnannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (603 aa)
recOUnannotated protein; Involved in DNA repair and RecF pathway recombination. (249 aa)
dgkAUnannotated protein. (114 aa)
ybeYUnannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (158 aa)
serCUnannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (359 aa)
rpsTUnannotated protein; Binds directly to 16S ribosomal RNA. (86 aa)
GCA_000702585_01645Unannotated protein. (144 aa)
rplTUnannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa)
rpmIUnannotated protein; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
dnaIUnannotated protein. (304 aa)
dnaBUnannotated protein. (450 aa)
nrnAUnannotated protein. (322 aa)
ackAUnannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (403 aa)
ezrAUnannotated protein. (576 aa)
rpsDUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (199 aa)
acsUnannotated protein. (568 aa)
GCA_000702585_01576Unannotated protein. (209 aa)
trxA_2Unannotated protein. (103 aa)
yugI_2Unannotated protein. (130 aa)
ptsG_4Unannotated protein. (676 aa)
ptsG_2Unannotated protein. (508 aa)
GCA_000702585_01479Unannotated protein. (465 aa)
GCA_000702585_01476Unannotated protein. (422 aa)
yurYUnannotated protein. (259 aa)
GCA_000702585_01470Unannotated protein. (85 aa)
GCA_000702585_01463Unannotated protein. (594 aa)
GCA_000702585_01461Unannotated protein. (803 aa)
GCA_000702585_01444Unannotated protein. (319 aa)
yvyDUnannotated protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (186 aa)
GCA_000702585_01386Unannotated protein. (551 aa)
treBUnannotated protein. (482 aa)
dus_2Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (335 aa)
bcpUnannotated protein. (145 aa)
ribBAUnannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (394 aa)
nosUnannotated protein; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. (357 aa)
arsAUnannotated protein. (585 aa)
GCA_000702585_01223Unannotated protein. (1027 aa)
GCA_000702585_01184Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
GCA_000702585_01156Unannotated protein. (313 aa)
GCA_000702585_01155Unannotated protein. (323 aa)
bglF_2Unannotated protein. (490 aa)
GCA_000702585_01119Unannotated protein. (291 aa)
dapH_1Unannotated protein. (208 aa)
GCA_000702585_01087Unannotated protein. (328 aa)
gltB_1Unannotated protein; Belongs to the glutamate synthase family. (518 aa)
ptsG_1Unannotated protein. (502 aa)
rpmE2Unannotated protein. (80 aa)
spo0FUnannotated protein. (119 aa)
rffGUnannotated protein. (342 aa)
speBUnannotated protein; Belongs to the arginase family. (293 aa)
GCA_000702585_00916Unannotated protein. (457 aa)
GCA_000702585_00908Unannotated protein. (431 aa)
GCA_000702585_00884Unannotated protein. (326 aa)
mtnWUnannotated protein; Belongs to the RuBisCO large chain family. (384 aa)
mtnXUnannotated protein; Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene). (216 aa)
mtnBUnannotated protein; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily. (205 aa)
ubiBUnannotated protein. (545 aa)
mgtEUnannotated protein; Acts as a magnesium transporter. (452 aa)
GCA_000702585_00822Unannotated protein. (363 aa)
kynUUnannotated protein; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (425 aa)
GCA_000702585_00772Unannotated protein. (364 aa)
GCA_000702585_00763Unannotated protein. (280 aa)
aes_1Unannotated protein. (315 aa)
yhhWUnannotated protein; Belongs to the pirin family. (285 aa)
yocKUnannotated protein. (180 aa)
GCA_000702585_00734Unannotated protein. (355 aa)
rocFUnannotated protein; Belongs to the arginase family. (297 aa)
rpsIUnannotated protein; Belongs to the universal ribosomal protein uS9 family. (130 aa)
rplMUnannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (145 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (246 aa)
rplQUnannotated protein. (117 aa)
rpsKUnannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (131 aa)
rpsMUnannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (121 aa)
rpmJUnannotated protein; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rplOUnannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa)
rpmDUnannotated protein. (61 aa)
rpsEUnannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa)
rplRUnannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa)
rplFUnannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa)
rpsHUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rpsN2Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (89 aa)
rplEUnannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rplXUnannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (102 aa)
rplNUnannotated protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQUnannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (86 aa)
rpmCUnannotated protein; Belongs to the universal ribosomal protein uL29 family. (67 aa)
rplPUnannotated protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (145 aa)
rpsCUnannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (219 aa)
rplVUnannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa)
rpsSUnannotated protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa)
rplBUnannotated protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (276 aa)
rplWUnannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (93 aa)
rplDUnannotated protein; Forms part of the polypeptide exit tunnel. (207 aa)
rplCUnannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (208 aa)
rpsJUnannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
GCA_000702585_00652Unannotated protein. (169 aa)
rpsGUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (155 aa)
rpsLUnannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (140 aa)
rplLUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa)
rplJUnannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (168 aa)
rplAUnannotated protein; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (228 aa)
rplKUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
mrnCUnannotated protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (135 aa)
mcsBUnannotated protein; Catalyzes the specific phosphorylation of arginine residues in proteins. (348 aa)
dus_1Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (331 aa)
sulDUnannotated protein. (167 aa)
yugI_1Unannotated protein. (179 aa)
ispEUnannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (293 aa)
rnmVUnannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (186 aa)
recRUnannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa)
GCA_000702585_00555Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (105 aa)
tadAUnannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (166 aa)
dgkUnannotated protein. (211 aa)
dckUnannotated protein. (223 aa)
pdxSUnannotated protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (296 aa)
guaB_1Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (487 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (642 aa)
recFUnannotated protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (372 aa)
rpmHUnannotated protein; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
parBUnannotated protein; Belongs to the ParB family. (260 aa)
engDUnannotated protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)
rpsFUnannotated protein; Binds together with S18 to 16S ribosomal RNA. (95 aa)
rpsRUnannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (76 aa)
dnaCUnannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (450 aa)
GCA_000702585_00502Unannotated protein. (263 aa)
GCA_000702585_00497Unannotated protein. (358 aa)
dbpAUnannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (481 aa)
lip2_2Unannotated protein. (359 aa)
alkAUnannotated protein. (299 aa)
GCA_000702585_00423Unannotated protein. (146 aa)
GCA_000702585_00396Unannotated protein. (380 aa)
yflT_3Unannotated protein. (203 aa)
yflT_2Unannotated protein. (171 aa)
gldA_2Unannotated protein. (368 aa)
yxeP_2Unannotated protein. (393 aa)
ptsG_6Unannotated protein. (495 aa)
bglF_4Unannotated protein. (616 aa)
GCA_000702585_00269Unannotated protein. (215 aa)
ptsG_5Unannotated protein. (542 aa)
yqjYUnannotated protein. (151 aa)
queDUnannotated protein. (151 aa)
lip2_1Unannotated protein. (332 aa)
lgrD_2Unannotated protein. (356 aa)
GCA_000702585_00223Unannotated protein. (166 aa)
GCA_000702585_00220Unannotated protein. (216 aa)
aes_2Unannotated protein. (311 aa)
argCUnannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (341 aa)
argBUnannotated protein. (259 aa)
gluP_2Unannotated protein. (241 aa)
udk_3Unannotated protein. (210 aa)
GCA_000702585_00124Unannotated protein. (194 aa)
puoUnannotated protein. (346 aa)
crtP_2Unannotated protein. (500 aa)
GCA_000702585_00041Unannotated protein. (172 aa)
purFUnannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (469 aa)
Your Current Organism:
Exiguobacterium aurantiacum
NCBI taxonomy Id: 1397694
Other names: E. aurantiacum DSM 6208, Exiguobacterium aurantiacum DSM 6208
Server load: low (16%) [HD]