39 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0107990	Acetamidase. (560 aa)
	SCP_0115270	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (1000 aa)
	SCP_0214020	Amino-acid permease inda1. (578 aa)
	SCP_0214000	Uncharacterized amino-acid permease. (538 aa)
	SCP_0302470	Dicarboxylic amino acid permease. (540 aa)
	SCP_0304140	Uncharacterized protein. (715 aa)
	SCP_0312050	Probable amino-acid permease. (528 aa)
	SCP_0405300	Cell wall alpha-1,3-glucan synthase ags1. (2353 aa)
	SCP_0405350	Uncharacterized protein. (580 aa)
	SCP_0405550	Uncharacterized protein. (627 aa)
	SCP_0407220	Uncharacterized protein; Belongs to the pirin family. (351 aa)
	SCP_0409060	Alpha-amylase 1. (529 aa)
	SCP_0412740	Probable alpha/beta-glucosidase; Belongs to the glycosyl hydrolase 31 family. (890 aa)
	SCP_0506610	Uncharacterized protein. (263 aa)
	SCP_0702710	Uncharacterized amino-acid permease. (279 aa)
	SCP_0706640	Arginine permease CAN1. (600 aa)
	SCP_0702700	Uncharacterized protein. (219 aa)
	SCP_0806110	Uncharacterized protein. (1158 aa)
	SCP_0805760	Fe2OG dioxygenase domain-containing protein. (321 aa)
	SCP_0901960	Dicarboxylic amino acid permease. (544 aa)
	SCP_0902170	Pirin domain-containing protein; Belongs to the pirin family. (268 aa)
	SCP_0904610	Rho-GAP domain-containing protein. (1127 aa)
	SCP_0905760	Probable proline-specific permease. (547 aa)
	SCP_0905730	Uncharacterized protein. (2017 aa)
	SCP_1003820	VHS domain-containing protein. (771 aa)
	SCP_1003830	Beta-hexosaminidase. (561 aa)
	SCP_1004390	Alpha-amylase A type-3. (502 aa)
	SCP_1101730	Uncharacterized protein. (153 aa)
	SCP_1101610	High-affinity methionine permease. (562 aa)
	SCP_1104080	Uncharacterized amino-acid permease. (535 aa)
	SCP_1103970	Uncharacterized amino-acid permease. (535 aa)
	SCP_1301860	Glycoside hydrolase family 13 protein. (532 aa)
	SCP_1402140	High-affinity methionine permease. (594 aa)
	SCP_1402150	High-affinity methionine permease. (588 aa)
	SCP_1500120	Amidase signature enzyme. (562 aa)
	SCP_1701130	Osmotin, thaumatin-like protein. (257 aa)
	SCP_1701520	Glyco_hydro_92 domain-containing protein. (123 aa)
	SCP_1701510	Uncharacterized secreted. (705 aa)
	SCP_1801460	Uncharacterized protein. (118 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0107990	SCP_0405300	A0A401G6Z0	A0A401GIW7	Acetamidase.	Cell wall alpha-1,3-glucan synthase ags1.	0.692
SCP_0107990	SCP_0409060	A0A401G6Z0	A0A401GK37	Acetamidase.	Alpha-amylase 1.	0.692
SCP_0107990	SCP_0805760	A0A401G6Z0	A0A401GV24	Acetamidase.	Fe2OG dioxygenase domain-containing protein.	0.897
SCP_0107990	SCP_1004390	A0A401G6Z0	A0A401GYB8	Acetamidase.	Alpha-amylase A type-3.	0.692
SCP_0107990	SCP_1301860	A0A401G6Z0	A0A401H1R4	Acetamidase.	Glycoside hydrolase family 13 protein.	0.692
SCP_0107990	SCP_1801460	A0A401G6Z0	A0A401H6T2	Acetamidase.	Uncharacterized protein.	0.692
SCP_0115270	SCP_0409060	A0A401G8Z9	A0A401GK37	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Alpha-amylase 1.	0.756
SCP_0115270	SCP_0412740	A0A401G8Z9	A0A401GL37	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Probable alpha/beta-glucosidase; Belongs to the glycosyl hydrolase 31 family.	0.745
SCP_0115270	SCP_0805760	A0A401G8Z9	A0A401GV24	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Fe2OG dioxygenase domain-containing protein.	0.669
SCP_0115270	SCP_1004390	A0A401G8Z9	A0A401GYB8	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Alpha-amylase A type-3.	0.780
SCP_0115270	SCP_1301860	A0A401G8Z9	A0A401H1R4	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Glycoside hydrolase family 13 protein.	0.766
SCP_0115270	SCP_1801460	A0A401G8Z9	A0A401H6T2	Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.546
SCP_0214000	SCP_0405300	A0A401GDF2	A0A401GIW7	Uncharacterized amino-acid permease.	Cell wall alpha-1,3-glucan synthase ags1.	0.627
SCP_0214000	SCP_0409060	A0A401GDF2	A0A401GK37	Uncharacterized amino-acid permease.	Alpha-amylase 1.	0.627
SCP_0214000	SCP_0805760	A0A401GDF2	A0A401GV24	Uncharacterized amino-acid permease.	Fe2OG dioxygenase domain-containing protein.	0.627
SCP_0214000	SCP_1004390	A0A401GDF2	A0A401GYB8	Uncharacterized amino-acid permease.	Alpha-amylase A type-3.	0.627
SCP_0214000	SCP_1301860	A0A401GDF2	A0A401H1R4	Uncharacterized amino-acid permease.	Glycoside hydrolase family 13 protein.	0.627
SCP_0214000	SCP_1801460	A0A401GDF2	A0A401H6T2	Uncharacterized amino-acid permease.	Uncharacterized protein.	0.627
SCP_0214020	SCP_0304140	A0A401GDE6	A0A401GEY9	Amino-acid permease inda1.	Uncharacterized protein.	0.566
SCP_0214020	SCP_0405300	A0A401GDE6	A0A401GIW7	Amino-acid permease inda1.	Cell wall alpha-1,3-glucan synthase ags1.	0.630