22 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0100980	Protein AIM2. (249 aa)
	SCP_0100990	Protein AIM2. (249 aa)
	SCP_0105000	RabGAP/TBC protein. (661 aa)
	SCP_0111240	Uncharacterized protein. (1395 aa)
	SCP_0111620	Carboxymethylenebutenolidase. (275 aa)
	SCP_0113490	Uncharacterized AIM2 family protein. (262 aa)
	SCP_0114290	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (241 aa)
	SCP_0114560	Uncharacterized protein. (245 aa)
	SCP_0114810	Protein AIM2. (249 aa)
	SCP_0206810	Uncharacterized protein. (167 aa)
	SCP_0304400	Uncharacterized protein. (1250 aa)
	SCP_0307190	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (216 aa)
	SCP_0404120	Uncharacterized protein. (1188 aa)
	SCP_0403470	Uncharacterized protein. (1363 aa)
	SCP_0405250	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (134 aa)
	SCP_0405990	Trafficking protein particle complex subunit BET3. (205 aa)
	SCP_0408290	Trafficking protein particle complex subunit 13. (726 aa)
	SCP_0501150	Protein AIM2. (263 aa)
	SCP_0902940	TPR_REGION domain-containing protein. (1034 aa)
	SCP_0904960	Protein AIM2. (249 aa)
	SCP_0905100	Protein AIM2. (249 aa)
	SCP_1801300	Protein AIM2. (248 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0100980	SCP_0111620	A0A401G4W8	A0A401G804	Protein AIM2.	Carboxymethylenebutenolidase.	0.432
SCP_0100990	SCP_0111620	A0A401G4X0	A0A401G804	Protein AIM2.	Carboxymethylenebutenolidase.	0.432
SCP_0105000	SCP_0111240	A0A401G627	A0A401G7U7	RabGAP/TBC protein.	Uncharacterized protein.	0.665
SCP_0105000	SCP_0114290	A0A401G627	A0A401G8N4	RabGAP/TBC protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.552
SCP_0105000	SCP_0206810	A0A401G627	A0A401GBF6	RabGAP/TBC protein.	Uncharacterized protein.	0.602
SCP_0105000	SCP_0304400	A0A401G627	A0A401GF08	RabGAP/TBC protein.	Uncharacterized protein.	0.604
SCP_0105000	SCP_0405990	A0A401G627	A0A401GJ60	RabGAP/TBC protein.	Trafficking protein particle complex subunit BET3.	0.422
SCP_0105000	SCP_0408290	A0A401G627	A0A401GJV5	RabGAP/TBC protein.	Trafficking protein particle complex subunit 13.	0.607
SCP_0105000	SCP_0902940	A0A401G627	A0A401GW25	RabGAP/TBC protein.	TPR_REGION domain-containing protein.	0.618
SCP_0111240	SCP_0105000	A0A401G7U7	A0A401G627	Uncharacterized protein.	RabGAP/TBC protein.	0.665
SCP_0111240	SCP_0114290	A0A401G7U7	A0A401G8N4	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.999
SCP_0111240	SCP_0114560	A0A401G7U7	A0A401G8T3	Uncharacterized protein.	Uncharacterized protein.	0.999
SCP_0111240	SCP_0206810	A0A401G7U7	A0A401GBF6	Uncharacterized protein.	Uncharacterized protein.	0.998
SCP_0111240	SCP_0304400	A0A401G7U7	A0A401GF08	Uncharacterized protein.	Uncharacterized protein.	0.999
SCP_0111240	SCP_0307190	A0A401G7U7	A0A401GFM9	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
SCP_0111240	SCP_0403470	A0A401G7U7	A0A401GIN0	Uncharacterized protein.	Uncharacterized protein.	0.991
SCP_0111240	SCP_0404120	A0A401G7U7	A0A401GIM5	Uncharacterized protein.	Uncharacterized protein.	0.992
SCP_0111240	SCP_0405250	A0A401G7U7	A0A401GJ58	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
SCP_0111240	SCP_0405990	A0A401G7U7	A0A401GJ60	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.999
SCP_0111240	SCP_0408290	A0A401G7U7	A0A401GJV5	Uncharacterized protein.	Trafficking protein particle complex subunit 13.	0.988