12 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0109120	Nucleoporin. (1357 aa)
	SCP_0115780	Nuclear pore protein. (861 aa)
	SCP_0214860	Uncharacterized protein. (2050 aa)
	SCP_0403120	Uncharacterized protein. (1194 aa)
	SCP_0503840	Nucleoporin nup44. (670 aa)
	SCP_0508890	ELYS domain-containing protein. (776 aa)
	SCP_0601940	Uncharacterized protein. (688 aa)
	SCP_0900180	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (726 aa)
	SCP_0804680	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (842 aa)
	SCP_1003540	Uncharacterized protein. (2117 aa)
	SCP_1101270	Nucleoporin seh1; Belongs to the WD repeat SEC13 family. (424 aa)
	SCP_1201240	Nucleoporin nup45. (451 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0109120	SCP_0115780	A0A401G780	A0A401G952	Nucleoporin.	Nuclear pore protein.	0.999
SCP_0109120	SCP_0214860	A0A401G780	A0A401GDL2	Nucleoporin.	Uncharacterized protein.	0.991
SCP_0109120	SCP_0403120	A0A401G780	A0A401GIF0	Nucleoporin.	Uncharacterized protein.	0.991
SCP_0109120	SCP_0503840	A0A401G780	A0A401GMB2	Nucleoporin.	Nucleoporin nup44.	0.997
SCP_0109120	SCP_0508890	A0A401G780	A0A401GNQ6	Nucleoporin.	ELYS domain-containing protein.	0.982
SCP_0109120	SCP_0601940	A0A401G780	A0A401GPS3	Nucleoporin.	Uncharacterized protein.	0.988
SCP_0109120	SCP_0804680	A0A401G780	A0A401GW04	Nucleoporin.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.990
SCP_0109120	SCP_0900180	A0A401G780	A0A401GV81	Nucleoporin.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.998
SCP_0109120	SCP_1003540	A0A401G780	A0A401GY23	Nucleoporin.	Uncharacterized protein.	0.999
SCP_0109120	SCP_1101270	A0A401G780	A0A401GZ58	Nucleoporin.	Nucleoporin seh1; Belongs to the WD repeat SEC13 family.	0.992
SCP_0109120	SCP_1201240	A0A401G780	A0A401H0I7	Nucleoporin.	Nucleoporin nup45.	0.959
SCP_0115780	SCP_0109120	A0A401G952	A0A401G780	Nuclear pore protein.	Nucleoporin.	0.999
SCP_0115780	SCP_0214860	A0A401G952	A0A401GDL2	Nuclear pore protein.	Uncharacterized protein.	0.994
SCP_0115780	SCP_0403120	A0A401G952	A0A401GIF0	Nuclear pore protein.	Uncharacterized protein.	0.990
SCP_0115780	SCP_0503840	A0A401G952	A0A401GMB2	Nuclear pore protein.	Nucleoporin nup44.	0.997
SCP_0115780	SCP_0508890	A0A401G952	A0A401GNQ6	Nuclear pore protein.	ELYS domain-containing protein.	0.980
SCP_0115780	SCP_0601940	A0A401G952	A0A401GPS3	Nuclear pore protein.	Uncharacterized protein.	0.989
SCP_0115780	SCP_0804680	A0A401G952	A0A401GW04	Nuclear pore protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.995
SCP_0115780	SCP_0900180	A0A401G952	A0A401GV81	Nuclear pore protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
SCP_0115780	SCP_1003540	A0A401G952	A0A401GY23	Nuclear pore protein.	Uncharacterized protein.	0.999