15 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0307010	ATP synthase subunit 5, mitochondrial. (211 aa)
	SCP_0103980	Uncharacterized protein. (89 aa)
	SCP_0204300	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (173 aa)
	SCP_0308720	Uncharacterized protein. (1167 aa)
	SCP_0308710	ATP synthase subunit delta, mitochondrial. (164 aa)
	SCP_0401140	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (542 aa)
	SCP_0401940	Uncharacterized protein. (73 aa)
	SCP_0503810	ATP synthase subunit gamma. (297 aa)
	SCP_0706670	ATP synthase subunit f, mitochondrial. (98 aa)
	SCP_0902510	Uncharacterized protein. (1379 aa)
	SCP_1002450	Uncharacterized protein. (125 aa)
	SCP_1102130	Uncharacterized protein. (78 aa)
	SCP_1601060	ATP synthase subunit 4, mitochondrial. (240 aa)
	SCP_1800340	ATP synthase subunit g, mitochondrial. (172 aa)
	SCP_1900650	ATP synthase subunit J, mitochondrial. (62 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0103980	SCP_0204300	A0A401G5U2	A0A401GAR2	Uncharacterized protein.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.563
SCP_0103980	SCP_0308710	A0A401G5U2	A0A401GG94	Uncharacterized protein.	ATP synthase subunit delta, mitochondrial.	0.440
SCP_0103980	SCP_0401140	A0A401G5U2	A0A401GHZ2	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.959
SCP_0103980	SCP_0401940	A0A401G5U2	A0A401GI84	Uncharacterized protein.	Uncharacterized protein.	0.516
SCP_0103980	SCP_0503810	A0A401G5U2	A0A401GM84	Uncharacterized protein.	ATP synthase subunit gamma.	0.555
SCP_0103980	SCP_0706670	A0A401G5U2	A0A401GTG8	Uncharacterized protein.	ATP synthase subunit f, mitochondrial.	0.533
SCP_0103980	SCP_0902510	A0A401G5U2	A0A401GW13	Uncharacterized protein.	Uncharacterized protein.	0.530
SCP_0103980	SCP_1002450	A0A401G5U2	A0A401GXW2	Uncharacterized protein.	Uncharacterized protein.	0.654
SCP_0103980	SCP_1102130	A0A401G5U2	A0A401GZD0	Uncharacterized protein.	Uncharacterized protein.	0.845
SCP_0103980	SCP_1601060	A0A401G5U2	A0A401H4U5	Uncharacterized protein.	ATP synthase subunit 4, mitochondrial.	0.982
SCP_0103980	SCP_1800340	A0A401G5U2	A0A401H6G6	Uncharacterized protein.	ATP synthase subunit g, mitochondrial.	0.856
SCP_0103980	SCP_1900650	A0A401G5U2	A0A401H703	Uncharacterized protein.	ATP synthase subunit J, mitochondrial.	0.688
SCP_0204300	SCP_0103980	A0A401GAR2	A0A401G5U2	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	Uncharacterized protein.	0.563
SCP_0204300	SCP_0307010	A0A401GAR2	A0A401GFM0	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit 5, mitochondrial.	0.999
SCP_0204300	SCP_0308710	A0A401GAR2	A0A401GG94	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit delta, mitochondrial.	0.996
SCP_0204300	SCP_0308720	A0A401GAR2	A0A401GG31	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	Uncharacterized protein.	0.995
SCP_0204300	SCP_0401140	A0A401GAR2	A0A401GHZ2	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
SCP_0204300	SCP_0401940	A0A401GAR2	A0A401GI84	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	Uncharacterized protein.	0.999
SCP_0204300	SCP_0503810	A0A401GAR2	A0A401GM84	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit gamma.	0.999
SCP_0204300	SCP_0706670	A0A401GAR2	A0A401GTG8	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit f, mitochondrial.	0.990