36 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0107170	Importin N-terminal domain-containing protein. (932 aa)
	SCP_0115780	Nuclear pore protein. (861 aa)
	SCP_0116670	Importin-alpha re-exporter. (902 aa)
	SCP_0116680	Importin N-terminal domain-containing protein. (117 aa)
	SCP_0204820	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (290 aa)
	SCP_0206430	RTP1_C1 domain-containing protein. (1061 aa)
	SCP_0206790	RTP1_C1 domain-containing protein. (891 aa)
	SCP_0206830	Uncharacterized protein. (1268 aa)
	SCP_0207280	ARM repeat-containing protein. (997 aa)
	SCP_0207420	Ran-specific GTPase-activating protein. (214 aa)
	SCP_0213080	Nucleoporin2-domain-containing protein. (1016 aa)
	SCP_1502530	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (346 aa)
	SCP_1400230	Nup96 domain-containing protein. (877 aa)
	SCP_1201240	Nucleoporin nup45. (451 aa)
	SCP_1102600	Uncharacterized protein. (471 aa)
	SCP_1000960	Importin-13. (1047 aa)
	SCP_1003760	Importin subunit beta-1. (864 aa)
	SCP_0804680	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (842 aa)
	SCP_0406400	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (213 aa)
	SCP_0900740	Probable importin subunit beta-4. (1081 aa)
	SCP_0306520	Importin subunit beta-3. (925 aa)
	SCP_0900180	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (726 aa)
	SCP_0304850	Importin subunit beta-2. (920 aa)
	SCP_0214860	Uncharacterized protein. (2050 aa)
	SCP_0801480	Protein transport protein; Belongs to the WD repeat SEC13 family. (340 aa)
	SCP_0704080	Iwr1 domain-containing protein. (334 aa)
	SCP_0507120	Protein OPI10 homolog. (204 aa)
	SCP_0503840	Nucleoporin nup44. (670 aa)
	SCP_0503100	Probable importin. (1046 aa)
	SCP_0500930	TPR_MLP1_2 domain-containing protein. (1955 aa)
	SCP_0410700	Nuclear transport factor 2. (125 aa)
	SCP_0408710	Mog1p/PsbP-like protein. (120 aa)
	SCP_0101270	NTF2-related export protein. (156 aa)
	SCP_0101460	ARM repeat-containing protein. (683 aa)
	SCP_0101870	ARM repeat-containing protein. (958 aa)
	SCP_0107120	Importin subunit alpha; Belongs to the importin alpha family. (533 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0101270	SCP_0115780	A0A401G516	A0A401G952	NTF2-related export protein.	Nuclear pore protein.	0.689
SCP_0101270	SCP_0206830	A0A401G516	A0A401GBH6	NTF2-related export protein.	Uncharacterized protein.	0.693
SCP_0101270	SCP_0207420	A0A401G516	A0A401GBL2	NTF2-related export protein.	Ran-specific GTPase-activating protein.	0.772
SCP_0101270	SCP_0213080	A0A401G516	A0A401GD84	NTF2-related export protein.	Nucleoporin2-domain-containing protein.	0.693
SCP_0101270	SCP_0410700	A0A401G516	A0A401GKJ2	NTF2-related export protein.	Nuclear transport factor 2.	0.525
SCP_0101270	SCP_0500930	A0A401G516	A0A401GLN7	NTF2-related export protein.	TPR_MLP1_2 domain-containing protein.	0.679
SCP_0101270	SCP_0503840	A0A401G516	A0A401GMB2	NTF2-related export protein.	Nucleoporin nup44.	0.700
SCP_0101270	SCP_0804680	A0A401G516	A0A401GW04	NTF2-related export protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.711
SCP_0101270	SCP_0900180	A0A401G516	A0A401GV81	NTF2-related export protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.697
SCP_0101270	SCP_1003760	A0A401G516	A0A401GY93	NTF2-related export protein.	Importin subunit beta-1.	0.406
SCP_0101270	SCP_1201240	A0A401G516	A0A401H0I7	NTF2-related export protein.	Nucleoporin nup45.	0.614
SCP_0101270	SCP_1400230	A0A401G516	A0A401H2I4	NTF2-related export protein.	Nup96 domain-containing protein.	0.693
SCP_0101460	SCP_0304850	A0A401G538	A0A401GF11	ARM repeat-containing protein.	Importin subunit beta-2.	0.545
SCP_0101460	SCP_0900740	A0A401G538	A0A401GVH0	ARM repeat-containing protein.	Probable importin subunit beta-4.	0.405
SCP_0101870	SCP_0107120	A0A401G579	A0A401G6N7	ARM repeat-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.540
SCP_0101870	SCP_0107170	A0A401G579	A0A401G6P6	ARM repeat-containing protein.	Importin N-terminal domain-containing protein.	0.476
SCP_0101870	SCP_0207280	A0A401G579	A0A401GBH7	ARM repeat-containing protein.	ARM repeat-containing protein.	0.489
SCP_0101870	SCP_0304850	A0A401G579	A0A401GF11	ARM repeat-containing protein.	Importin subunit beta-2.	0.614
SCP_0101870	SCP_0306520	A0A401G579	A0A401GFI4	ARM repeat-containing protein.	Importin subunit beta-3.	0.624
SCP_0101870	SCP_0406400	A0A401G579	A0A401GJB1	ARM repeat-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.858