(20 nodes) SCF ubiquitin ligase complex network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0902820	F-box protein. (461 aa)
	SCP_0504930	F-box/WD repeat-containing protein. (673 aa)
	SCP_0705130	WD_REPEATS_REGION domain-containing protein. (785 aa)
	SCP_0104190	F-box domain-containing protein. (970 aa)
	SCP_0200940	WD_REPEATS_REGION domain-containing protein. (792 aa)
	SCP_0208550	Uncharacterized protein. (365 aa)
	SCP_0213820	SCF E3 ubiquitin ligase complex F-box protein. (445 aa)
	SCP_1003110	WD_REPEATS_REGION domain-containing protein. (815 aa)
	SCP_1004720	Uncharacterized protein. (886 aa)
	SCP_1002990	WD40 repeat-like protein. (650 aa)
	SCP_1000270	WD_REPEATS_REGION domain-containing protein. (346 aa)
	SCP_1000280	WD_REPEATS_REGION domain-containing protein. (824 aa)
	SCP_1900080	F-box/WD repeat-containing protein. (556 aa)
	SCP_1200320	Uncharacterized protein. (734 aa)
	SCP_0400790	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (125 aa)
	SCP_0402430	Cell division control protein. (871 aa)
	SCP_0409850	Probable E3 ubiquitin ligase complex SCF subunit. (777 aa)
	SCP_0411050	WD_REPEATS_REGION domain-containing protein. (1354 aa)
	SCP_0502550	Cullin-1; Belongs to the cullin family. (798 aa)
	SCP_0505150	RING-box protein. (112 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0104190	SCP_0213820	A0A401G5V1	A0A401GDH9	F-box domain-containing protein.	SCF E3 ubiquitin ligase complex F-box protein.	0.455
SCP_0104190	SCP_0402430	A0A401G5V1	A0A401GI72	F-box domain-containing protein.	Cell division control protein.	0.459
SCP_0104190	SCP_0502550	A0A401G5V1	A0A401GLZ6	F-box domain-containing protein.	Cullin-1; Belongs to the cullin family.	0.780
SCP_0104190	SCP_0505150	A0A401G5V1	A0A401GMM5	F-box domain-containing protein.	RING-box protein.	0.678
SCP_0104190	SCP_0902820	A0A401G5V1	A0A401GW40	F-box domain-containing protein.	F-box protein.	0.492
SCP_0104190	SCP_1002990	A0A401G5V1	A0A401GXY0	F-box domain-containing protein.	WD40 repeat-like protein.	0.459
SCP_0208550	SCP_0505150	A0A401GBX5	A0A401GMM5	Uncharacterized protein.	RING-box protein.	0.505
SCP_0213820	SCP_0104190	A0A401GDH9	A0A401G5V1	SCF E3 ubiquitin ligase complex F-box protein.	F-box domain-containing protein.	0.455
SCP_0213820	SCP_0402430	A0A401GDH9	A0A401GI72	SCF E3 ubiquitin ligase complex F-box protein.	Cell division control protein.	0.806
SCP_0213820	SCP_0409850	A0A401GDH9	A0A401GKB5	SCF E3 ubiquitin ligase complex F-box protein.	Probable E3 ubiquitin ligase complex SCF subunit.	0.801
SCP_0213820	SCP_0502550	A0A401GDH9	A0A401GLZ6	SCF E3 ubiquitin ligase complex F-box protein.	Cullin-1; Belongs to the cullin family.	0.947
SCP_0213820	SCP_0504930	A0A401GDH9	A0A401GNW9	SCF E3 ubiquitin ligase complex F-box protein.	F-box/WD repeat-containing protein.	0.753
SCP_0213820	SCP_0505150	A0A401GDH9	A0A401GMM5	SCF E3 ubiquitin ligase complex F-box protein.	RING-box protein.	0.939
SCP_0213820	SCP_0902820	A0A401GDH9	A0A401GW40	SCF E3 ubiquitin ligase complex F-box protein.	F-box protein.	0.469
SCP_0213820	SCP_1002990	A0A401GDH9	A0A401GXY0	SCF E3 ubiquitin ligase complex F-box protein.	WD40 repeat-like protein.	0.810
SCP_0213820	SCP_1900080	A0A401GDH9	A0A401H6Z6	SCF E3 ubiquitin ligase complex F-box protein.	F-box/WD repeat-containing protein.	0.693
SCP_0400790	SCP_0502550	A0A401GHS6	A0A401GLZ6	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Cullin-1; Belongs to the cullin family.	0.845
SCP_0400790	SCP_0505150	A0A401GHS6	A0A401GMM5	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	RING-box protein.	0.916
SCP_0402430	SCP_0104190	A0A401GI72	A0A401G5V1	Cell division control protein.	F-box domain-containing protein.	0.459
SCP_0402430	SCP_0213820	A0A401GI72	A0A401GDH9	Cell division control protein.	SCF E3 ubiquitin ligase complex F-box protein.	0.806