(12 nodes) Cell junction network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0209940	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (656 aa)
	SCP_0307820	Uncharacterized protein. (978 aa)
	SCP_0312940	SEC7 domain-containing protein. (1683 aa)
	SCP_0411420	Senescence domain-containing protein. (693 aa)
	SCP_0703350	Uncharacterized protein. (580 aa)
	SCP_0701790	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	SCP_0900580	Uncharacterized protein. (611 aa)
	SCP_0901050	Dimer_Tnp_hAT domain-containing protein. (513 aa)
	SCP_0805180	SLD3 domain-containing protein. (486 aa)
	SCP_1601740	Uncharacterized protein. (426 aa)
	SCP_0207950	Uncharacterized protein. (377 aa)
	SCP_0108270	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (935 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0701790	SCP_0703350	A0A401GTC7	A0A401GSK5	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.428
SCP_0701790	SCP_1601740	A0A401GTC7	A0A401H525	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.561
SCP_0703350	SCP_0701790	A0A401GSK5	A0A401GTC7	Uncharacterized protein.	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.428
SCP_0805180	SCP_1601740	A0A401GW52	A0A401H525	SLD3 domain-containing protein.	Uncharacterized protein.	0.652
SCP_1601740	SCP_0701790	A0A401H525	A0A401GTC7	Uncharacterized protein.	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.561
SCP_1601740	SCP_0805180	A0A401H525	A0A401GW52	Uncharacterized protein.	SLD3 domain-containing protein.	0.652