16 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0300880	Uncharacterized protein. (1014 aa)
	SCP_1900790	Uncharacterized protein. (809 aa)
	SCP_1900780	Uncharacterized protein. (133 aa)
	SCP_1900760	Uncharacterized protein. (102 aa)
	SCP_1502250	Uncharacterized protein. (536 aa)
	SCP_1502240	Uncharacterized protein. (496 aa)
	SCP_1101270	Nucleoporin seh1; Belongs to the WD repeat SEC13 family. (424 aa)
	SCP_0906340	Uncharacterized protein. (836 aa)
	SCP_0906330	Uncharacterized protein. (133 aa)
	SCP_0102730	Uncharacterized protein. (158 aa)
	SCP_0804680	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (842 aa)
	SCP_0900180	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (726 aa)
	SCP_0801480	Protein transport protein; Belongs to the WD repeat SEC13 family. (340 aa)
	SCP_0204010	Uncharacterized protein. (1369 aa)
	SCP_0102750	Uncharacterized protein. (790 aa)
	SCP_0102740	Uncharacterized protein. (133 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0102730	SCP_0801480	A0A401GX09	A0A401GTX1	Uncharacterized protein.	Protein transport protein; Belongs to the WD repeat SEC13 family.	0.872
SCP_0102730	SCP_0804680	A0A401GX09	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.910
SCP_0102730	SCP_0900180	A0A401GX09	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.882
SCP_0102730	SCP_1101270	A0A401GX09	A0A401GZ58	Uncharacterized protein.	Nucleoporin seh1; Belongs to the WD repeat SEC13 family.	0.866
SCP_0102740	SCP_0801480	A0A401G5F8	A0A401GTX1	Uncharacterized protein.	Protein transport protein; Belongs to the WD repeat SEC13 family.	0.872
SCP_0102740	SCP_0804680	A0A401G5F8	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.910
SCP_0102740	SCP_0900180	A0A401G5F8	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.882
SCP_0102740	SCP_1101270	A0A401G5F8	A0A401GZ58	Uncharacterized protein.	Nucleoporin seh1; Belongs to the WD repeat SEC13 family.	0.866
SCP_0102740	SCP_1502240	A0A401G5F8	A0A401H452	Uncharacterized protein.	Uncharacterized protein.	0.585
SCP_0102750	SCP_0801480	A0A401G5F9	A0A401GTX1	Uncharacterized protein.	Protein transport protein; Belongs to the WD repeat SEC13 family.	0.872
SCP_0102750	SCP_0804680	A0A401G5F9	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.928
SCP_0102750	SCP_0900180	A0A401G5F9	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.902
SCP_0102750	SCP_1101270	A0A401G5F9	A0A401GZ58	Uncharacterized protein.	Nucleoporin seh1; Belongs to the WD repeat SEC13 family.	0.866
SCP_0204010	SCP_0801480	A0A401GAK7	A0A401GTX1	Uncharacterized protein.	Protein transport protein; Belongs to the WD repeat SEC13 family.	0.872
SCP_0204010	SCP_0804680	A0A401GAK7	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.930
SCP_0204010	SCP_0900180	A0A401GAK7	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.901
SCP_0204010	SCP_1101270	A0A401GAK7	A0A401GZ58	Uncharacterized protein.	Nucleoporin seh1; Belongs to the WD repeat SEC13 family.	0.866
SCP_0300880	SCP_0801480	A0A401GE32	A0A401GTX1	Uncharacterized protein.	Protein transport protein; Belongs to the WD repeat SEC13 family.	0.872
SCP_0300880	SCP_0804680	A0A401GE32	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.932
SCP_0300880	SCP_0900180	A0A401GE32	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.905