30 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0503840	Nucleoporin nup44. (670 aa)
	SCP_1900890	SUN domain-containing protein. (386 aa)
	SCP_0109160	Ima1_N domain-containing protein. (554 aa)
	SCP_0113280	Nuclear protein localization protein. (658 aa)
	SCP_0115880	Nucleus export protein. (399 aa)
	SCP_0206830	Uncharacterized protein. (1268 aa)
	SCP_0208710	Major facilitator superfamily domain-containing protein. (480 aa)
	SCP_0209630	Vacuolar transporter chaperone 1. (125 aa)
	SCP_0213080	Nucleoporin2-domain-containing protein. (1016 aa)
	SCP_0301500	Uncharacterized protein. (687 aa)
	SCP_1603330	SUN domain-containing protein. (323 aa)
	SCP_1502690	tRNA ligase. (814 aa)
	SCP_1400230	Nup96 domain-containing protein. (877 aa)
	SCP_1301900	Uncharacterized protein. (205 aa)
	SCP_1301690	SUN domain-containing protein. (995 aa)
	SCP_1202210	HTH APSES-type domain-containing protein. (415 aa)
	SCP_1201240	Nucleoporin nup45. (451 aa)
	SCP_0306830	Phospholipid:diacylglycerol acyltransferase. (676 aa)
	ALG14	UDP-N-acetylglucosamine transferase subunit ALG14; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER. (206 aa)
	SCP_0404570	Uncharacterized protein. (402 aa)
	SCP_0405320	tRNA (guanine(26)-N(2))-dimethyltransferase. (586 aa)
	SCP_0406090	Uncharacterized protein. (827 aa)
	SCP_0411450	Cell division control protein 42 homolog. (191 aa)
	SCP_1200920	ATP-dependent RNA helicase DBP5. (465 aa)
	SCP_1003540	Uncharacterized protein. (2117 aa)
	SCP_0804680	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (842 aa)
	SCP_0900180	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (726 aa)
	SCP_0803320	CAAX prenyl protease 1. (832 aa)
	SCP_0601940	Uncharacterized protein. (688 aa)
	SCP_0506990	Peptidase_S9 domain-containing protein. (662 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0109160	SCP_0406090	A0A401G797	A0A401GJ68	Ima1_N domain-containing protein.	Uncharacterized protein.	0.507
SCP_0109160	SCP_1301690	A0A401G797	A0A401H1Q8	Ima1_N domain-containing protein.	SUN domain-containing protein.	0.463
SCP_0109160	SCP_1603330	A0A401G797	A0A401H5L4	Ima1_N domain-containing protein.	SUN domain-containing protein.	0.463
SCP_0109160	SCP_1900890	A0A401G797	A0A401H7C8	Ima1_N domain-containing protein.	SUN domain-containing protein.	0.463
SCP_0206830	SCP_0406090	A0A401GBH6	A0A401GJ68	Uncharacterized protein.	Uncharacterized protein.	0.464
SCP_0206830	SCP_0503840	A0A401GBH6	A0A401GMB2	Uncharacterized protein.	Nucleoporin nup44.	0.966
SCP_0206830	SCP_0601940	A0A401GBH6	A0A401GPS3	Uncharacterized protein.	Uncharacterized protein.	0.830
SCP_0206830	SCP_0804680	A0A401GBH6	A0A401GW04	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.967
SCP_0206830	SCP_0900180	A0A401GBH6	A0A401GV81	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.966
SCP_0206830	SCP_1003540	A0A401GBH6	A0A401GY23	Uncharacterized protein.	Uncharacterized protein.	0.944
SCP_0206830	SCP_1200920	A0A401GBH6	A0A401H0A8	Uncharacterized protein.	ATP-dependent RNA helicase DBP5.	0.447
SCP_0206830	SCP_1201240	A0A401GBH6	A0A401H0I7	Uncharacterized protein.	Nucleoporin nup45.	0.815
SCP_0213080	SCP_0406090	A0A401GD84	A0A401GJ68	Nucleoporin2-domain-containing protein.	Uncharacterized protein.	0.479
SCP_0213080	SCP_0503840	A0A401GD84	A0A401GMB2	Nucleoporin2-domain-containing protein.	Nucleoporin nup44.	0.967
SCP_0213080	SCP_0601940	A0A401GD84	A0A401GPS3	Nucleoporin2-domain-containing protein.	Uncharacterized protein.	0.830
SCP_0213080	SCP_0804680	A0A401GD84	A0A401GW04	Nucleoporin2-domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.971
SCP_0213080	SCP_0900180	A0A401GD84	A0A401GV81	Nucleoporin2-domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.970
SCP_0213080	SCP_1003540	A0A401GD84	A0A401GY23	Nucleoporin2-domain-containing protein.	Uncharacterized protein.	0.944
SCP_0213080	SCP_1200920	A0A401GD84	A0A401H0A8	Nucleoporin2-domain-containing protein.	ATP-dependent RNA helicase DBP5.	0.447
SCP_0213080	SCP_1201240	A0A401GD84	A0A401H0I7	Nucleoporin2-domain-containing protein.	Nucleoporin nup45.	0.904