STRINGSTRING
SCP_1401030 SCP_1401030 SCP_1401120 SCP_1401120 SCP_1400180 SCP_1400180 SCP_1400230 SCP_1400230 SCP_1302660 SCP_1302660 SCP_1302410 SCP_1302410 SCP_1301470 SCP_1301470 SCP_1300850 SCP_1300850 SCP_1202630 SCP_1202630 SCP_1202340 SCP_1202340 SCP_1201940 SCP_1201940 SCP_1201930 SCP_1201930 TIF6 TIF6 SCP_1200920 SCP_1200920 SCP_1200110 SCP_1200110 SCP_1101910 SCP_1101910 SCP_0906340 SCP_0906340 SCP_0906330 SCP_0906330 SCP_0102730 SCP_0102730 SCP_0905290 SCP_0905290 SCP_0804680 SCP_0804680 SCP_0901650 SCP_0901650 SCP_0801840 SCP_0801840 SCP_0900180 SCP_0900180 SUS1 SUS1 SCP_0801700 SCP_0801700 SCP_0703880 SCP_0703880 SCP_0701500 SCP_0701500 SCP_0605040 SCP_0605040 SCP_0602850 SCP_0602850 SCP_0506950 SCP_0506950 SCP_0101270 SCP_0101270 SCP_0101980 SCP_0101980 SCP_0102740 SCP_0102740 SCP_0102750 SCP_0102750 SCP_0103610 SCP_0103610 SCP_0104950 SCP_0104950 SCP_0106940 SCP_0106940 SCP_0111750 SCP_0111750 SCP_0113870 SCP_0113870 SCP_0115780 SCP_0115780 SCP_0116670 SCP_0116670 SCP_0116680 SCP_0116680 SCP_0203270 SCP_0203270 SCP_0203060 SCP_0203060 SCP_0204010 SCP_0204010 SCP_0206600 SCP_0206600 SCP_0207420 SCP_0207420 SCP_0207890 SCP_0207890 SCP_0209770 SCP_0209770 SCP_0210010 SCP_0210010 SCP_0209640 SCP_0209640 SCP_0210760 SCP_0210760 SCP_0210690 SCP_0210690 SCP_0213080 SCP_0213080 SCP_0213920 SCP_0213920 SCP_0214860 SCP_0214860 SCP_0214970 SCP_0214970 SCP_0214960 SCP_0214960 SCP_0301430 SCP_0301430 SCP_0300880 SCP_0300880 SCP_0306520 SCP_0306520 SCP_0308210 SCP_0308210 SCP_0309890 SCP_0309890 SCP_0310070 SCP_0310070 SCP_0310650 SCP_0310650 SCP_0505680 SCP_0505680 SCP_0500930 SCP_0500930 SCP_0409630 SCP_0409630 SCP_0408980 SCP_0408980 SCP_0406440 SCP_0406440 SCP_0408900 SCP_0408900 SCP_0406400 SCP_0406400 SCP_1900790 SCP_1900790 SCP_1900780 SCP_1900780 SCP_1900760 SCP_1900760 SCP_1502250 SCP_1502250 SCP_1502240 SCP_1502240 SCP_1402670 SCP_1402670 SCP_1400970 SCP_1400970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCP_1401030Uncharacterized protein. (928 aa)
SCP_1401120mRNA export protein. (221 aa)
SCP_1400180mRNA export protein. (228 aa)
SCP_1400230Nup96 domain-containing protein. (877 aa)
SCP_1302660J protein. (561 aa)
SCP_1302410Uncharacterized protein. (1728 aa)
SCP_1301470Uncharacterized protein. (1125 aa)
SCP_1300850Poly(A)+ RNA export protein. (352 aa)
SCP_120263026S proteasome complex subunit sem-1. (105 aa)
SCP_1202340Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1093 aa)
SCP_1201940Transcription factor IWS1. (370 aa)
SCP_1201930Uncharacterized protein. (523 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
SCP_1200920ATP-dependent RNA helicase DBP5. (465 aa)
SCP_1200110mRNA export factor mex67. (587 aa)
SCP_1101910Uncharacterized protein. (440 aa)
SCP_0906340Uncharacterized protein. (836 aa)
SCP_0906330Uncharacterized protein. (133 aa)
SCP_0102730Uncharacterized protein. (158 aa)
SCP_0905290DNA-directed RNA polymerase II subunit rpb4. (135 aa)
SCP_0804680Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (842 aa)
SCP_0901650Zinc finger protein. (123 aa)
SCP_0801840Uncharacterized protein. (1500 aa)
SCP_0900180Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (726 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (99 aa)
SCP_0801700Nuclear GTP-binding protein. (568 aa)
SCP_0703880Uncharacterized protein. (888 aa)
SCP_0701500SMAD/FHA domain-containing protein. (346 aa)
SCP_0605040U3 small nucleolar RNA-associated protein 22. (1237 aa)
SCP_0602850Uncharacterized protein. (565 aa)
SCP_0506950Zuotin. (384 aa)
SCP_0101270NTF2-related export protein. (156 aa)
SCP_0101980THO complex subunit 1. (770 aa)
SCP_0102740Uncharacterized protein. (133 aa)
SCP_0102750Uncharacterized protein. (790 aa)
SCP_0103610Protein LTV1. (544 aa)
SCP_0104950Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (676 aa)
SCP_0106940Large subunit GTPase 1. (697 aa)
SCP_011175040S ribosomal protein; Belongs to the universal ribosomal protein uS3 family. (259 aa)
SCP_0113870ATP-dependent RNA helicase SUB2. (439 aa)
SCP_0115780Nuclear pore protein. (861 aa)
SCP_0116670Importin-alpha re-exporter. (902 aa)
SCP_0116680Importin N-terminal domain-containing protein. (117 aa)
SCP_0203270Nuclear GTP-binding protein. (665 aa)
SCP_0203060Uncharacterized protein. (866 aa)
SCP_0204010Uncharacterized protein. (1369 aa)
SCP_0206600Uncharacterized THOC5 family. (210 aa)
SCP_0207420Ran-specific GTPase-activating protein. (214 aa)
SCP_0207890Uncharacterized protein. (2162 aa)
SCP_0209770Nucleoporin nup82. (848 aa)
SCP_0210010Protein CSN12 homolog. (428 aa)
SCP_0209640Uncharacterized protein. (355 aa)
SCP_0210760Uncharacterized protein. (355 aa)
SCP_0210690Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (322 aa)
SCP_0213080Nucleoporin2-domain-containing protein. (1016 aa)
SCP_0213920Uncharacterized ABC transporter ATP-binding protein. (640 aa)
SCP_0214860Uncharacterized protein. (2050 aa)
SCP_0214970Uncharacterized protein. (204 aa)
SCP_021496060S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (174 aa)
SCP_0301430Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (662 aa)
SCP_0300880Uncharacterized protein. (1014 aa)
SCP_0306520Importin subunit beta-3. (925 aa)
SCP_0308210mRNA export factor elf1. (1086 aa)
SCP_0309890Uncharacterized protein. (270 aa)
SCP_0310070RRM domain-containing protein. (270 aa)
SCP_0310650ARM repeat-containing protein. (876 aa)
SCP_0505680Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (447 aa)
SCP_0500930TPR_MLP1_2 domain-containing protein. (1955 aa)
SCP_0409630Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (627 aa)
SCP_0408980RNA-binding post-transcriptional regulator cip2. (541 aa)
SCP_040644018S rRNA (Guanine(1575)-N(7))-methyltransferase. (284 aa)
SCP_0408900Exportin-1. (1074 aa)
SCP_0406400GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (213 aa)
SCP_1900790Uncharacterized protein. (809 aa)
SCP_1900780Uncharacterized protein. (133 aa)
SCP_1900760Uncharacterized protein. (102 aa)
SCP_1502250Uncharacterized protein. (536 aa)
SCP_1502240Uncharacterized protein. (496 aa)
SCP_1402670Uncharacterized RNA-binding protein. (555 aa)
SCP_1400970Translation initiation factor RLI1. (602 aa)
Your Current Organism:
Sparassis crispa
NCBI taxonomy Id: 139825
Other names: S. crispa
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