(13 nodes) Chromosome separation network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_1301960	RecQ-mediated genome instability protein. (553 aa)
	SCP_1201590	Anaphase-promoting complex subunit cut9. (752 aa)
	SCP_0114590	Uncharacterized protein. (973 aa)
	SCP_0115990	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1601 aa)
	SCP_0214920	Structural maintenance of chromosomes protein. (1200 aa)
	SCP_0301630	PCI domain-containing protein. (106 aa)
	SCP_0307250	Anaphase-promoting complex subunit 8. (1132 aa)
	SCP_0400310	Probable 26S proteasome regulatory subunit. (385 aa)
	SCP_0600510	DNA repair protein. (985 aa)
	SCP_0510740	Probable 26S proteasome regulatory subunit. (503 aa)
	SCP_0700820	Protein kinase domain-containing protein. (834 aa)
	SCP_1101360	Peptidase C50 domain-containing protein. (2097 aa)
	SCP_1403380	Serine/threonine-protein kinase. (830 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0115990	SCP_0214920	A0A401G973	A0A401GDT1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Structural maintenance of chromosomes protein.	0.765
SCP_0115990	SCP_0307250	A0A401G973	A0A401GFR0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Anaphase-promoting complex subunit 8.	0.474
SCP_0115990	SCP_0600510	A0A401G973	A0A401GPC6	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	DNA repair protein.	0.477
SCP_0115990	SCP_1101360	A0A401G973	A0A401GZ80	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Peptidase C50 domain-containing protein.	0.747
SCP_0115990	SCP_1403380	A0A401G973	A0A401H3K8	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Serine/threonine-protein kinase.	0.594
SCP_0214920	SCP_0115990	A0A401GDT1	A0A401G973	Structural maintenance of chromosomes protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.765
SCP_0214920	SCP_0600510	A0A401GDT1	A0A401GPC6	Structural maintenance of chromosomes protein.	DNA repair protein.	0.512
SCP_0214920	SCP_1101360	A0A401GDT1	A0A401GZ80	Structural maintenance of chromosomes protein.	Peptidase C50 domain-containing protein.	0.833
SCP_0214920	SCP_1301960	A0A401GDT1	A0A401H1S5	Structural maintenance of chromosomes protein.	RecQ-mediated genome instability protein.	0.551
SCP_0214920	SCP_1403380	A0A401GDT1	A0A401H3K8	Structural maintenance of chromosomes protein.	Serine/threonine-protein kinase.	0.762
SCP_0301630	SCP_0307250	A0A401GE38	A0A401GFR0	PCI domain-containing protein.	Anaphase-promoting complex subunit 8.	0.731
SCP_0301630	SCP_0510740	A0A401GE38	A0A401GQJ1	PCI domain-containing protein.	Probable 26S proteasome regulatory subunit.	0.993
SCP_0307250	SCP_0115990	A0A401GFR0	A0A401G973	Anaphase-promoting complex subunit 8.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.474
SCP_0307250	SCP_0301630	A0A401GFR0	A0A401GE38	Anaphase-promoting complex subunit 8.	PCI domain-containing protein.	0.731
SCP_0307250	SCP_0400310	A0A401GFR0	A0A401GHJ4	Anaphase-promoting complex subunit 8.	Probable 26S proteasome regulatory subunit.	0.731
SCP_0307250	SCP_1101360	A0A401GFR0	A0A401GZ80	Anaphase-promoting complex subunit 8.	Peptidase C50 domain-containing protein.	0.927
SCP_0307250	SCP_1201590	A0A401GFR0	A0A401H0J9	Anaphase-promoting complex subunit 8.	Anaphase-promoting complex subunit cut9.	0.999
SCP_0307250	SCP_1403380	A0A401GFR0	A0A401H3K8	Anaphase-promoting complex subunit 8.	Serine/threonine-protein kinase.	0.891
SCP_0400310	SCP_0307250	A0A401GHJ4	A0A401GFR0	Probable 26S proteasome regulatory subunit.	Anaphase-promoting complex subunit 8.	0.731
SCP_0400310	SCP_0510740	A0A401GHJ4	A0A401GQJ1	Probable 26S proteasome regulatory subunit.	Probable 26S proteasome regulatory subunit.	0.993