(20 nodes) Growing cell tip network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0200220	Uncharacterized protein. (574 aa)
	SCP_0207520	Serine/threonine-protein kinase CBK1; Belongs to the protein kinase superfamily. (486 aa)
	SCP_0303820	Uncharacterized protein. (251 aa)
	SCP_0306560	Uncharacterized protein. (1003 aa)
	SCP_0411450	Cell division control protein 42 homolog. (191 aa)
	SCP_1900320	Uncharacterized protein. (475 aa)
	SCP_1403080	Uncharacterized protein. (445 aa)
	SCP_1403060	Uncharacterized protein. (135 aa)
	SCP_1403140	Uncharacterized protein. (451 aa)
	SCP_1201370	Uncharacterized protein. (187 aa)
	SCP_1002480	Uncharacterized protein. (239 aa)
	SCP_0308190	Serine/threonine-protein kinase CBK1. (868 aa)
	SCP_1000240	GTP-binding protein. (213 aa)
	SCP_0900400	Uncharacterized protein. (539 aa)
	SCP_0602540	Uncharacterized protein. (319 aa)
	SCP_0309920	SH3 domain-containing protein. (1472 aa)
	SCP_0309410	Pali-domain-containing protein. (189 aa)
	SCP_0309940	Uncharacterized protein. (162 aa)
	SCP_0503220	Uncharacterized protein. (495 aa)
	SCP_0105400	Uncharacterized protein. (565 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0200220	SCP_0411450	A0A401G9I8	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.519
SCP_0200220	SCP_1000240	A0A401G9I8	A0A401GX66	Uncharacterized protein.	GTP-binding protein.	0.511
SCP_0207520	SCP_0411450	A0A401GBM1	A0A401GKT0	Serine/threonine-protein kinase CBK1; Belongs to the protein kinase superfamily.	Cell division control protein 42 homolog.	0.744
SCP_0207520	SCP_1000240	A0A401GBM1	A0A401GX66	Serine/threonine-protein kinase CBK1; Belongs to the protein kinase superfamily.	GTP-binding protein.	0.633
SCP_0306560	SCP_0411450	A0A401GFG0	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.658
SCP_0308190	SCP_0411450	A0A401GFX6	A0A401GKT0	Serine/threonine-protein kinase CBK1.	Cell division control protein 42 homolog.	0.744
SCP_0308190	SCP_1000240	A0A401GFX6	A0A401GX66	Serine/threonine-protein kinase CBK1.	GTP-binding protein.	0.633
SCP_0309920	SCP_0411450	A0A401GGK8	A0A401GKT0	SH3 domain-containing protein.	Cell division control protein 42 homolog.	0.519
SCP_0309920	SCP_1000240	A0A401GGK8	A0A401GX66	SH3 domain-containing protein.	GTP-binding protein.	0.511
SCP_0309940	SCP_0411450	A0A401GGE7	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.514
SCP_0309940	SCP_1000240	A0A401GGE7	A0A401GX66	Uncharacterized protein.	GTP-binding protein.	0.506
SCP_0411450	SCP_0200220	A0A401GKT0	A0A401G9I8	Cell division control protein 42 homolog.	Uncharacterized protein.	0.519
SCP_0411450	SCP_0207520	A0A401GKT0	A0A401GBM1	Cell division control protein 42 homolog.	Serine/threonine-protein kinase CBK1; Belongs to the protein kinase superfamily.	0.744
SCP_0411450	SCP_0306560	A0A401GKT0	A0A401GFG0	Cell division control protein 42 homolog.	Uncharacterized protein.	0.658
SCP_0411450	SCP_0308190	A0A401GKT0	A0A401GFX6	Cell division control protein 42 homolog.	Serine/threonine-protein kinase CBK1.	0.744
SCP_0411450	SCP_0309920	A0A401GKT0	A0A401GGK8	Cell division control protein 42 homolog.	SH3 domain-containing protein.	0.519
SCP_0411450	SCP_0309940	A0A401GKT0	A0A401GGE7	Cell division control protein 42 homolog.	Uncharacterized protein.	0.514
SCP_0411450	SCP_0503220	A0A401GKT0	A0A401GNF5	Cell division control protein 42 homolog.	Uncharacterized protein.	0.519
SCP_0411450	SCP_0602540	A0A401GKT0	A0A401GPY0	Cell division control protein 42 homolog.	Uncharacterized protein.	0.519
SCP_0411450	SCP_0900400	A0A401GKT0	A0A401GVF5	Cell division control protein 42 homolog.	Uncharacterized protein.	0.519