(9 nodes) Cell cortex of cell tip network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0310290	Uncharacterized protein. (202 aa)
	SCP_0112920	Uncharacterized protein. (256 aa)
	SCP_0106880	Uncharacterized protein. (1479 aa)
	SCP_1202570	GTPase-activating protein. (774 aa)
	SCP_0411450	Cell division control protein 42 homolog. (191 aa)
	SCP_0507760	Uncharacterized protein. (830 aa)
	SCP_1004290	Uncharacterized protein. (164 aa)
	SCP_0214160	Ras-GAP domain-containing protein. (452 aa)
	SCP_0306560	Uncharacterized protein. (1003 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0106880	SCP_0306560	A0A401G6K9	A0A401GFG0	Uncharacterized protein.	Uncharacterized protein.	0.533
SCP_0106880	SCP_0411450	A0A401G6K9	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.687
SCP_0214160	SCP_0411450	A0A401GDE7	A0A401GKT0	Ras-GAP domain-containing protein.	Cell division control protein 42 homolog.	0.750
SCP_0306560	SCP_0106880	A0A401GFG0	A0A401G6K9	Uncharacterized protein.	Uncharacterized protein.	0.533
SCP_0306560	SCP_0411450	A0A401GFG0	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.658
SCP_0411450	SCP_0106880	A0A401GKT0	A0A401G6K9	Cell division control protein 42 homolog.	Uncharacterized protein.	0.687
SCP_0411450	SCP_0214160	A0A401GKT0	A0A401GDE7	Cell division control protein 42 homolog.	Ras-GAP domain-containing protein.	0.750
SCP_0411450	SCP_0306560	A0A401GKT0	A0A401GFG0	Cell division control protein 42 homolog.	Uncharacterized protein.	0.658
SCP_0411450	SCP_1202570	A0A401GKT0	A0A401H0W4	Cell division control protein 42 homolog.	GTPase-activating protein.	0.750
SCP_1202570	SCP_0411450	A0A401H0W4	A0A401GKT0	GTPase-activating protein.	Cell division control protein 42 homolog.	0.750