(77 nodes) Winged helix-like DNA-binding domain superfamily network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_1300570	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1234 aa)
	SCP_0407780	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (567 aa)
	SCP_0407790	H15 domain-containing protein. (222 aa)
	SCP_0405420	Replication factor A protein. (279 aa)
	SCP_0102160	CRAL-TRIO domain-containing protein. (1321 aa)
	SCP_0102820	Fork-head domain-containing protein. (383 aa)
	SCP_0103020	Fork-head domain-containing protein. (391 aa)
	SCP_0103240	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (423 aa)
	SCP_0103360	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (420 aa)
	SCP_0106830	PCI domain-containing protein. (1390 aa)
	SCP_0107740	Serine/threonine-protein kinase rio2. (506 aa)
	SCP_0107780	Peroxisomal membrane protein. (302 aa)
	SCP_0109080	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (711 aa)
	SCP_0112740	Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (243 aa)
	SCP_0115190	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (539 aa)
	SCP_0204060	Developmental regulator flbA. (639 aa)
	SCP_0205060	HSF_DOMAIN domain-containing protein. (615 aa)
	SCP_0205920	Uncharacterized protein. (666 aa)
	SCP_0206520	RFX-type winged-helix domain-containing protein. (850 aa)
	SCP_1501900	Pyridoxal reductase. (288 aa)
	SCP_1502520	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (824 aa)
	SCP_1502570	Pre-mRNA-splicing factor brr2. (2160 aa)
	SCP_1601800	ESCRT-II complex vps25 subunit. (201 aa)
	SCP_1601020	HSF_DOMAIN domain-containing protein. (620 aa)
	SCP_1602940	Rho1 guanine nucleotide exchange factor 1. (1401 aa)
	SCP_1801710	Fork-head domain-containing protein. (800 aa)
	SCP_1900970	Fork-head domain-containing protein. (383 aa)
	SCP_1900680	Transcription factor prr1. (829 aa)
	SCP_0407990	DDE_3 domain-containing protein. (319 aa)
	SCP_0208400	Fork-head domain-containing protein. (314 aa)
	SCP_0209500	Helicase. (1428 aa)
	SCP_0210010	Protein CSN12 homolog. (428 aa)
	SCP_0211370	Pex14_N domain-containing protein. (396 aa)
	SCP_0301750	Transcriptional adapter ADA2. (645 aa)
	SCP_0303930	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (537 aa)
	SCP_0306500	O-methyltransferase gedA. (452 aa)
	SCP_0309590	Meiotic recombination protein. (486 aa)
	SCP_0312170	CULLIN_2 domain-containing protein; Belongs to the cullin family. (816 aa)
	SCP_0400780	ATP-dependent DNA helicase MER3. (1587 aa)
	SCP_0400460	DEP domain-containing protein. (1550 aa)
	SCP_0402620	HSF_DOMAIN domain-containing protein. (663 aa)
	SCP_0403650	RING-type domain-containing protein. (333 aa)
	SCP_0405400	Uncharacterized protein. (290 aa)
	SCP_0409280	Uncharacterized protein. (1149 aa)
	SCP_0410010	H15 domain-containing protein. (265 aa)
	SCP_0411260	Lactamase-like protein. (340 aa)
	SCP_0502550	Cullin-1; Belongs to the cullin family. (798 aa)
	SCP_0505910	Uncharacterized protein. (483 aa)
	SCP_0506830	4-O-methyltransferase 1. (869 aa)
	SCP_0509790	Vacuolar-sorting protein. (251 aa)
	SCP_0510450	SWIRM-domain-containing protein. (727 aa)
	SCP_0600200	O-methyltransferase gedA. (448 aa)
	SCP_0600230	O-methyltransferase gedA. (448 aa)
	SCP_0600290	O-methyltransferase gedA. (448 aa)
	SCP_0600850	O-methyltransferase gedA. (448 aa)
	SCP_0601140	Alkyltransferase-like protein. (141 aa)
	SCP_0601930	O-methyltransferase tpcA. (447 aa)
	SCP_0601910	O-methyltransferase gedA. (451 aa)
	SCP_0601920	O-methyltransferase tpcA. (447 aa)
	SCP_0602820	Uncharacterized protein. (336 aa)
	SCP_0602920	HSF_DOMAIN domain-containing protein. (95 aa)
	SCP_0701760	4-O-methyltransferase 1. (468 aa)
	SCP_0701640	Anaphase-promoting complex subunit 2; Belongs to the cullin family. (755 aa)
	SCP_0702220	O-methyltransferase gedA. (465 aa)
	SCP_0703190	H15 domain-containing protein. (661 aa)
	SCP_0703940	40S ribosomal protein S19-A. (162 aa)
	SCP_0904360	Fork-head domain-containing protein. (697 aa)
	SCP_1000980	Uncharacterized protein. (515 aa)
	SCP_1003190	GLUE N-terminal domain-containing protein. (640 aa)
	SCP_1100130	COP9 signalosome complex subunit 4. (508 aa)
	SCP_1102040	HTH La-type RNA-binding domain-containing protein. (1168 aa)
	SCP_1202330	Cullin-3; Belongs to the cullin family. (785 aa)
	SCP_1202160	Curved DNA-binding protein. (396 aa)
	SCP_1202670	Transcription initiation factor IIF subunit beta. (321 aa)
	SCP_1202910	Transcription initiation factor IIF subunit beta. (330 aa)
	SCP_1203030	40S ribosomal protein S10-B. (146 aa)
	SCP_1203440	Homologous-pairing protein. (263 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0102820	SCP_0103020	A0A401G5H2	A0A401G5J6	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.579
SCP_0102820	SCP_0115190	A0A401G5H2	A0A401G8X8	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.552
SCP_0102820	SCP_0205920	A0A401G5H2	A0A401GB50	Fork-head domain-containing protein.	Uncharacterized protein.	0.510
SCP_0102820	SCP_0303930	A0A401G5H2	A0A401GEQ3	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.552
SCP_0102820	SCP_1300570	A0A401G5H2	A0A401H1H5	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.552
SCP_0102820	SCP_1801710	A0A401G5H2	A0A401H6T1	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.583
SCP_0103020	SCP_0102820	A0A401G5J6	A0A401G5H2	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.579
SCP_0103020	SCP_0115190	A0A401G5J6	A0A401G8X8	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.608
SCP_0103020	SCP_0206520	A0A401G5J6	A0A401GBB4	Fork-head domain-containing protein.	RFX-type winged-helix domain-containing protein.	0.484
SCP_0103020	SCP_0208400	A0A401G5J6	A0A401GBU5	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.570
SCP_0103020	SCP_0303930	A0A401G5J6	A0A401GEQ3	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.608
SCP_0103020	SCP_0904360	A0A401G5J6	A0A401GWF7	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.561
SCP_0103020	SCP_1300570	A0A401G5J6	A0A401H1H5	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.608
SCP_0103020	SCP_1900970	A0A401G5J6	A0A401H729	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.579
SCP_0103240	SCP_0703940	A0A401G5L3	A0A401GSK1	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	40S ribosomal protein S19-A.	0.679
SCP_0103240	SCP_1203030	A0A401G5L3	A0A401H0Y6	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	40S ribosomal protein S10-B.	0.618
SCP_0103360	SCP_0703940	A0A401G5L9	A0A401GSK1	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	40S ribosomal protein S19-A.	0.679
SCP_0103360	SCP_1203030	A0A401G5L9	A0A401H0Y6	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	40S ribosomal protein S10-B.	0.618
SCP_0106830	SCP_0502550	A0A401G6K5	A0A401GLZ6	PCI domain-containing protein.	Cullin-1; Belongs to the cullin family.	0.660
SCP_0106830	SCP_0701640	A0A401G6K5	A0A401GS40	PCI domain-containing protein.	Anaphase-promoting complex subunit 2; Belongs to the cullin family.	0.629