45 items (Sparassis crispa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0410650	Uncharacterized protein. (209 aa)
	SCP_1900790	Uncharacterized protein. (809 aa)
	SCP_1900780	Uncharacterized protein. (133 aa)
	SCP_1900760	Uncharacterized protein. (102 aa)
	SCP_1502250	Uncharacterized protein. (536 aa)
	SCP_1502240	Uncharacterized protein. (496 aa)
	SCP_1403380	Serine/threonine-protein kinase. (830 aa)
	SCP_1401840	Uncharacterized protein. (51 aa)
	SCP_1401270	Histone H2B; Belongs to the histone H2B family. (147 aa)
	SCP_1401260	Histone H2A; Belongs to the histone H2A family. (138 aa)
	SCP_1401200	Histone H2B; Belongs to the histone H2B family. (148 aa)
	SCP_1003540	Uncharacterized protein. (2117 aa)
	SCP_0904630	Histone H2A; Belongs to the histone H2A family. (183 aa)
	SCP_1002290	Histone H2A; Belongs to the histone H2A family. (153 aa)
	SCP_1001390	Uncharacterized protein. (2330 aa)
	SCP_0906340	Uncharacterized protein. (836 aa)
	SCP_0906330	Uncharacterized protein. (133 aa)
	SCP_0102730	Uncharacterized protein. (158 aa)
	SCP_0801590	FCP1 homology domain-containing protein. (627 aa)
	SCP_0700700	mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (132 aa)
	SCP_0700690	Uncharacterized protein. (647 aa)
	SCP_0700190	Uncharacterized protein. (210 aa)
	SCP_0601940	Uncharacterized protein. (688 aa)
	SCP_0502810	Uncharacterized protein. (495 aa)
	SCP_0507430	F-box domain-containing protein. (373 aa)
	SCP_0506330	Kinase-like protein. (853 aa)
	SCP_0505180	PH domain-containing protein. (3456 aa)
	SCP_0412590	Uncharacterized protein. (772 aa)
	SCP_0412560	Protein kinase domain-containing protein. (591 aa)
	SCP_0407840	Uncharacterized protein. (1296 aa)
	SCP_0407370	GTP-binding protein. (205 aa)
	SCP_0403140	Histone H2B; Belongs to the histone H2B family. (480 aa)
	SCP_0300880	Uncharacterized protein. (1014 aa)
	SCP_0214860	Uncharacterized protein. (2050 aa)
	SCP_0210820	LNS2-domain-containing protein. (1206 aa)
	SCP_0209780	Nsp1_C domain-containing protein. (704 aa)
	SCP_0209660	NIF-domain-containing protein. (541 aa)
	SCP_0206830	Uncharacterized protein. (1268 aa)
	SCP_0206840	Uncharacterized protein. (837 aa)
	SCP_0204010	Uncharacterized protein. (1369 aa)
	SCP_0112880	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (270 aa)
	SCP_0105040	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	SCP_0104640	Structural maintenance of chromosomes protein. (1512 aa)
	SCP_0102750	Uncharacterized protein. (790 aa)
	SCP_0102740	Uncharacterized protein. (133 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0102730	SCP_0206830	A0A401GX09	A0A401GBH6	Uncharacterized protein.	Uncharacterized protein.	0.731
SCP_0102730	SCP_0206840	A0A401GX09	A0A401GBE2	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102730	SCP_0209780	A0A401GX09	A0A401GC95	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.997
SCP_0102730	SCP_0214860	A0A401GX09	A0A401GDL2	Uncharacterized protein.	Uncharacterized protein.	0.826
SCP_0102730	SCP_0407840	A0A401GX09	A0A401GJR5	Uncharacterized protein.	Uncharacterized protein.	0.718
SCP_0102730	SCP_0410650	A0A401GX09	A0A401GKJ7	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102730	SCP_0601940	A0A401GX09	A0A401GPS3	Uncharacterized protein.	Uncharacterized protein.	0.733
SCP_0102730	SCP_0700190	A0A401GX09	A0A401GRP6	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102730	SCP_1001390	A0A401GX09	A0A401GXE3	Uncharacterized protein.	Uncharacterized protein.	0.768
SCP_0102730	SCP_1003540	A0A401GX09	A0A401GY23	Uncharacterized protein.	Uncharacterized protein.	0.882
SCP_0102740	SCP_0206830	A0A401G5F8	A0A401GBH6	Uncharacterized protein.	Uncharacterized protein.	0.731
SCP_0102740	SCP_0206840	A0A401G5F8	A0A401GBE2	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102740	SCP_0209780	A0A401G5F8	A0A401GC95	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.997
SCP_0102740	SCP_0214860	A0A401G5F8	A0A401GDL2	Uncharacterized protein.	Uncharacterized protein.	0.778
SCP_0102740	SCP_0407840	A0A401G5F8	A0A401GJR5	Uncharacterized protein.	Uncharacterized protein.	0.718
SCP_0102740	SCP_0410650	A0A401G5F8	A0A401GKJ7	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102740	SCP_0601940	A0A401G5F8	A0A401GPS3	Uncharacterized protein.	Uncharacterized protein.	0.733
SCP_0102740	SCP_0700190	A0A401G5F8	A0A401GRP6	Uncharacterized protein.	Uncharacterized protein.	0.658
SCP_0102740	SCP_1001390	A0A401G5F8	A0A401GXE3	Uncharacterized protein.	Uncharacterized protein.	0.768
SCP_0102740	SCP_1003540	A0A401G5F8	A0A401GY23	Uncharacterized protein.	Uncharacterized protein.	0.882