(26 nodes) p53-Independent DNA Damage Response network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0102850	Proteasome activator pa28, REG alpha/beta subunit. (256 aa)
	SCP_1402580	Protein kinase domain-containing protein. (711 aa)
	SCP_1602620	Ubiquitin-40S ribosomal protein. (159 aa)
	SCP_0307270	Protein kinase domain-containing protein. (716 aa)
	SCP_0403810	Protein kinase domain-containing protein. (1096 aa)
	SCP_0409930	Rhodanese domain-containing protein. (913 aa)
	SCP_0508830	Protein kinase domain-containing protein. (745 aa)
	SCP_0310380	Uncharacterized protein. (389 aa)
	SCP_0115210	Pkinase-domain-containing protein. (557 aa)
	SCP_0204210	Protein kinase domain-containing protein. (329 aa)
	SCP_0312630	Polyubiquitin. (384 aa)
	SCP_0204240	Protein kinase domain-containing protein. (371 aa)
	SCP_0209550	Uncharacterized protein. (347 aa)
	SCP_0214930	Kinase-like protein. (651 aa)
	SCP_0301130	Uncharacterized protein. (503 aa)
	SCP_0302570	Serine/threonine-protein kinase cds1. (652 aa)
	SCP_0303770	Protein kinase domain-containing protein. (395 aa)
	SCP_0509900	Protein kinase domain-containing protein. (394 aa)
	SCP_0509870	Protein kinase domain-containing protein. (402 aa)
	SCP_0509890	Protein kinase domain-containing protein. (401 aa)
	SCP_0510280	Ubiquitin-domain-containing protein. (286 aa)
	SCP_0601000	Serine/threonine-protein kinase CHK1; Belongs to the protein kinase superfamily. (472 aa)
	SCP_1103250	Negative regulator of sexual conjugation and meiosis; Belongs to the protein kinase superfamily. (483 aa)
	SCP_1103390	Protein kinase domain-containing protein. (731 aa)
	SCP_1103260	Negative regulator of sexual conjugation and meiosis. (508 aa)
	SCP_1400160	Uncharacterized protein. (151 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0102850	SCP_0209550	A0A401G5G9	A0A401GC57	Proteasome activator pa28, REG alpha/beta subunit.	Uncharacterized protein.	0.717
SCP_0102850	SCP_0312630	A0A401G5G9	A0A401GH49	Proteasome activator pa28, REG alpha/beta subunit.	Polyubiquitin.	0.699
SCP_0102850	SCP_0409930	A0A401G5G9	A0A401GKB2	Proteasome activator pa28, REG alpha/beta subunit.	Rhodanese domain-containing protein.	0.670
SCP_0102850	SCP_0510280	A0A401G5G9	A0A401GP95	Proteasome activator pa28, REG alpha/beta subunit.	Ubiquitin-domain-containing protein.	0.677
SCP_0102850	SCP_1400160	A0A401G5G9	A0A401H2F5	Proteasome activator pa28, REG alpha/beta subunit.	Uncharacterized protein.	0.592
SCP_0102850	SCP_1602620	A0A401G5G9	A0A401H5D7	Proteasome activator pa28, REG alpha/beta subunit.	Ubiquitin-40S ribosomal protein.	0.681
SCP_0115210	SCP_0302570	A0A401G8Z4	A0A401GED4	Pkinase-domain-containing protein.	Serine/threonine-protein kinase cds1.	0.830
SCP_0115210	SCP_0409930	A0A401G8Z4	A0A401GKB2	Pkinase-domain-containing protein.	Rhodanese domain-containing protein.	0.724
SCP_0204210	SCP_0302570	A0A401GAM5	A0A401GED4	Protein kinase domain-containing protein.	Serine/threonine-protein kinase cds1.	0.788
SCP_0204210	SCP_0409930	A0A401GAM5	A0A401GKB2	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.724
SCP_0204240	SCP_0302570	A0A401GAQ1	A0A401GED4	Protein kinase domain-containing protein.	Serine/threonine-protein kinase cds1.	0.788
SCP_0204240	SCP_0409930	A0A401GAQ1	A0A401GKB2	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.724
SCP_0209550	SCP_0102850	A0A401GC57	A0A401G5G9	Uncharacterized protein.	Proteasome activator pa28, REG alpha/beta subunit.	0.717
SCP_0209550	SCP_0312630	A0A401GC57	A0A401GH49	Uncharacterized protein.	Polyubiquitin.	0.717
SCP_0209550	SCP_0510280	A0A401GC57	A0A401GP95	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.653
SCP_0209550	SCP_1602620	A0A401GC57	A0A401H5D7	Uncharacterized protein.	Ubiquitin-40S ribosomal protein.	0.700
SCP_0214930	SCP_0409930	A0A401GDL5	A0A401GKB2	Kinase-like protein.	Rhodanese domain-containing protein.	0.661
SCP_0301130	SCP_0409930	A0A401GDY3	A0A401GKB2	Uncharacterized protein.	Rhodanese domain-containing protein.	0.661
SCP_0302570	SCP_0115210	A0A401GED4	A0A401G8Z4	Serine/threonine-protein kinase cds1.	Pkinase-domain-containing protein.	0.830
SCP_0302570	SCP_0204210	A0A401GED4	A0A401GAM5	Serine/threonine-protein kinase cds1.	Protein kinase domain-containing protein.	0.788