(76 nodes) Golgi-to-ER retrograde transport network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_0113030	Uncharacterized protein. (811 aa)
	SCP_0113120	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (968 aa)
	SCP_0114410	F-box domain-containing protein. (560 aa)
	SCP_0115500	Lysophospholipase. (609 aa)
	SCP_0203310	Uncharacterized protein. (467 aa)
	SCP_0202800	Kinesin-domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1604 aa)
	SCP_0203620	F-box domain-containing protein. (505 aa)
	SCP_0205870	Protein transport protein; Belongs to the synaptobrevin family. (219 aa)
	SCP_0206030	ADP-ribosylation factor-like protein; Belongs to the small GTPase superfamily. Arf family. (187 aa)
	SCP_0207440	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1037 aa)
	SCP_0207800	Syntaxin-18_N domain-containing protein. (387 aa)
	SCP_0207430	Endosomal protein. (190 aa)
	SCP_0210090	Uncharacterized protein. (301 aa)
	SCP_0210640	Vesicular-fusion protein. (796 aa)
	SCP_0210670	Uncharacterized protein. (574 aa)
	SCP_0211160	ADP-ribosylation factor GTPase-activating protein. (428 aa)
	SCP_0212300	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	SCP_0212090	Uncharacterized protein. (361 aa)
	SCP_0214120	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (842 aa)
	SCP_0301240	Uncharacterized protein. (295 aa)
	SCP_0301570	Uncharacterized protein. (142 aa)
	SCP_0301540	F-box domain-containing protein. (485 aa)
	SCP_0301600	Uncharacterized protein. (283 aa)
	SCP_0302820	Uncharacterized protein. (182 aa)
	SCP_0304590	Uncharacterized protein. (190 aa)
	SCP_0305010	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (185 aa)
	SCP_0304970	ER lumen protein-retaining receptor. (212 aa)
	SCP_0307670	F-box domain-containing protein. (574 aa)
	SCP_0311020	Uncharacterized protein. (431 aa)
	SCP_0313160	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	SCP_0400020	Lysophospholipase. (605 aa)
	SCP_0400920	Uncharacterized protein. (85 aa)
	SCP_0400960	Kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2081 aa)
	SCP_0403610	Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (970 aa)
	SCP_0407370	GTP-binding protein. (205 aa)
	SCP_0407620	SEC7 domain-containing protein. (1496 aa)
	SCP_0501330	Uncharacterized protein. (532 aa)
	SCP_0507730	Uncharacterized protein. (177 aa)
	SCP_0510210	Endoplasmic reticulum vesicle protein. (225 aa)
	SCP_0510380	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1211 aa)
	SCP_0601370	Uncharacterized protein. (82 aa)
	SCP_0902980	Protein ERP1. (217 aa)
	SCP_0904240	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (314 aa)
	SCP_0901630	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (683 aa)
	SCP_1100790	Surfeit locus protein 4 homolog. (312 aa)
	SCP_1101510	F-box domain-containing protein. (462 aa)
	SCP_1103310	Probable alpha-L-arabinofuranosidase. (630 aa)
	SCP_1303490	F-box domain-containing protein. (523 aa)
	SCP_1402360	F-box domain-containing protein. (531 aa)
	SCP_1500130	F-box domain-containing protein. (633 aa)
	SCP_1602600	Dsl1_C domain-containing protein. (922 aa)
	SCP_1800720	F-box domain-containing protein. (528 aa)
	SCP_0602200	F-box domain-containing protein. (542 aa)
	SCP_0700580	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (842 aa)
	SCP_0701240	F-box domain-containing protein. (543 aa)
	SCP_0606330	Uncharacterized protein. (588 aa)
	SCP_0701220	F-box domain-containing protein. (551 aa)
	SCP_0701250	F-box domain-containing protein. (487 aa)
	SCP_0805380	F-box domain-containing protein. (514 aa)
	SCP_0900080	F-box domain-containing protein. (544 aa)
	SCP_0806070	Uncharacterized protein. (513 aa)
	SCP_0806100	Uncharacterized protein. (305 aa)
	SCP_0801330	GTP-binding protein. (224 aa)
	SCP_0805690	F-box domain-containing protein. (522 aa)
	SCP_0804740	F-box domain-containing protein. (562 aa)
	SCP_0804520	F-box domain-containing protein. (568 aa)
	SCP_0802670	Uncharacterized membrane protein. (215 aa)
	SCP_0701160	Uncharacterized protein. (289 aa)
	SCP_0705090	ADP-ribosylation factor GTPase-activating protein. (483 aa)
	SCP_0703930	F-box domain-containing protein. (496 aa)
	SCP_0101390	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (529 aa)
	SCP_0101720	CAP-Gly domain-containing protein. (1664 aa)
	SCP_0103410	Coatomer subunit beta. (1486 aa)
	SCP_0104100	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (925 aa)
	SCP_0107410	Sec39 domain-containing protein. (824 aa)
	SCP_0108800	Vesicular-fusion protein. (289 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0101390	SCP_0103410	A0A401G521	A0A401G5M1	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit beta.	0.999
SCP_0101390	SCP_0104100	A0A401G521	A0A401G5T6	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.999
SCP_0101390	SCP_0107410	A0A401G521	A0A401G6T7	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Sec39 domain-containing protein.	0.774
SCP_0101390	SCP_0108800	A0A401G521	A0A401G774	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Vesicular-fusion protein.	0.712
SCP_0101390	SCP_0113030	A0A401G521	A0A401G8B7	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein.	0.829
SCP_0101390	SCP_0203620	A0A401G521	A0A401GAG6	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	F-box domain-containing protein.	0.740
SCP_0101390	SCP_0205870	A0A401G521	A0A401GB59	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Protein transport protein; Belongs to the synaptobrevin family.	0.853
SCP_0101390	SCP_0206030	A0A401G521	A0A401GB63	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	ADP-ribosylation factor-like protein; Belongs to the small GTPase superfamily. Arf family.	0.813
SCP_0101390	SCP_0207430	A0A401G521	A0A401GBN5	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Endosomal protein.	0.818
SCP_0101390	SCP_0210090	A0A401G521	A0A401GC88	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein.	0.978
SCP_0101390	SCP_0210640	A0A401G521	A0A401GCH4	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Vesicular-fusion protein.	0.724
SCP_0101390	SCP_0211160	A0A401G521	A0A401GCL4	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	ADP-ribosylation factor GTPase-activating protein.	0.802
SCP_0101390	SCP_0212300	A0A401G521	A0A401GCV9	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.813
SCP_0101390	SCP_0214120	A0A401G521	A0A401GDF9	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.996
SCP_0101390	SCP_0304970	A0A401G521	A0A401GF28	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	ER lumen protein-retaining receptor.	0.825
SCP_0101390	SCP_0305010	A0A401G521	A0A401GF27	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.985
SCP_0101390	SCP_0313160	A0A401G521	A0A401GHB7	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.813
SCP_0101390	SCP_0407370	A0A401G521	A0A401GJL4	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	GTP-binding protein.	0.789
SCP_0101390	SCP_0407620	A0A401G521	A0A401GJN2	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	SEC7 domain-containing protein.	0.722
SCP_0101390	SCP_0510210	A0A401G521	A0A401GP30	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Endoplasmic reticulum vesicle protein.	0.965