(13 nodes) CDC42 GTPase cycle network (Sparassis crispa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCP_1204010	Uncharacterized protein. (666 aa)
	SCP_1200850	Rho-GTPase-activating protein. (386 aa)
	SCP_0902710	Uncharacterized protein. (1475 aa)
	SCP_0600280	Uncharacterized protein. (169 aa)
	SCP_0411450	Cell division control protein 42 homolog. (191 aa)
	SCP_0408990	Uncharacterized protein. (825 aa)
	SCP_0409020	Uncharacterized protein. (1340 aa)
	SCP_0309490	Rho guanine nucleotide exchange factor scd1. (958 aa)
	SCP_0307820	Uncharacterized protein. (978 aa)
	SCP_0305520	Uncharacterized protein. (2071 aa)
	SCP_0305300	DH domain-containing protein. (987 aa)
	SCP_0304270	RhoGAP-domain-containing protein. (1519 aa)
	SCP_0205290	Rho GDP-dissociation inhibitor. (203 aa)

Your Current Organism:

Sparassis crispa

NCBI taxonomy Id: 139825
Other names: S. crispa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCP_0205290	SCP_0304270	A0A401GB10	A0A401GEV6	Rho GDP-dissociation inhibitor.	RhoGAP-domain-containing protein.	0.516
SCP_0205290	SCP_0309490	A0A401GB10	A0A401GGC7	Rho GDP-dissociation inhibitor.	Rho guanine nucleotide exchange factor scd1.	0.496
SCP_0205290	SCP_0411450	A0A401GB10	A0A401GKT0	Rho GDP-dissociation inhibitor.	Cell division control protein 42 homolog.	0.982
SCP_0205290	SCP_0902710	A0A401GB10	A0A401GW31	Rho GDP-dissociation inhibitor.	Uncharacterized protein.	0.407
SCP_0304270	SCP_0205290	A0A401GEV6	A0A401GB10	RhoGAP-domain-containing protein.	Rho GDP-dissociation inhibitor.	0.516
SCP_0304270	SCP_0305300	A0A401GEV6	A0A401GF59	RhoGAP-domain-containing protein.	DH domain-containing protein.	0.920
SCP_0304270	SCP_0305520	A0A401GEV6	A0A401GF88	RhoGAP-domain-containing protein.	Uncharacterized protein.	0.897
SCP_0304270	SCP_0309490	A0A401GEV6	A0A401GGC7	RhoGAP-domain-containing protein.	Rho guanine nucleotide exchange factor scd1.	0.925
SCP_0304270	SCP_0411450	A0A401GEV6	A0A401GKT0	RhoGAP-domain-containing protein.	Cell division control protein 42 homolog.	0.990
SCP_0304270	SCP_0600280	A0A401GEV6	A0A401GP82	RhoGAP-domain-containing protein.	Uncharacterized protein.	0.897
SCP_0304270	SCP_0902710	A0A401GEV6	A0A401GW31	RhoGAP-domain-containing protein.	Uncharacterized protein.	0.995
SCP_0304270	SCP_1200850	A0A401GEV6	A0A401H0E6	RhoGAP-domain-containing protein.	Rho-GTPase-activating protein.	0.765
SCP_0304270	SCP_1204010	A0A401GEV6	A0A401H168	RhoGAP-domain-containing protein.	Uncharacterized protein.	0.897
SCP_0305300	SCP_0304270	A0A401GF59	A0A401GEV6	DH domain-containing protein.	RhoGAP-domain-containing protein.	0.920
SCP_0305300	SCP_0309490	A0A401GF59	A0A401GGC7	DH domain-containing protein.	Rho guanine nucleotide exchange factor scd1.	0.609
SCP_0305300	SCP_0411450	A0A401GF59	A0A401GKT0	DH domain-containing protein.	Cell division control protein 42 homolog.	0.963
SCP_0305520	SCP_0304270	A0A401GF88	A0A401GEV6	Uncharacterized protein.	RhoGAP-domain-containing protein.	0.897
SCP_0305520	SCP_0309490	A0A401GF88	A0A401GGC7	Uncharacterized protein.	Rho guanine nucleotide exchange factor scd1.	0.410
SCP_0305520	SCP_0411450	A0A401GF88	A0A401GKT0	Uncharacterized protein.	Cell division control protein 42 homolog.	0.760
SCP_0305520	SCP_0902710	A0A401GF88	A0A401GW31	Uncharacterized protein.	Uncharacterized protein.	0.708